Marinomonas sp. MWYL1: Mmwyl1_2114
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Entry
Mmwyl1_2114 CDS
T00567
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmw
Marinomonas sp. MWYL1
Brite
KEGG Orthology (KO) [BR:
mmw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmw03032
]
Mmwyl1_2114
03400 DNA repair and recombination proteins [BR:
mmw03400
]
Mmwyl1_2114
Enzymes [BR:
mmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mmwyl1_2114
DNA replication proteins [BR:
mmw03032
]
Prokaryotic type
DNA Topoisomerases
Mmwyl1_2114
DNA repair and recombination proteins [BR:
mmw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mmwyl1_2114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Ribosomal_L10
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABR71036
UniProt:
A6VX57
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Position
2391644..2394271
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AA seq
875 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNDFIVKSSVGHIRDLPSGTTATSTPQERAKQAALTRKM
SPEEKLEYKSSKARKQLISRMGVDPESNWKAHYEILPGKEKVVDELKRLAKNADTIYLAT
DLDREGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIKAAFETPSELDMDRVNAQQARRF
LDRVVGFMVSPLLWSKVARGLSAGRVQSVAVRLIVEREKEIRAFVPDEFWELDAMLATPS
KEVIKFEAAKYQDKEYRPVNKAQSDEHVARLNDAKYLVSSREDKPTSSKPSAPFITSTLQ
QAASTRLGYGVKKTMMLAQRLYEGGYITYMRTDSTNLSVDAVEALRGYILSKFGEAYLPA
EPIRYSSKEGAQEAHEAIRPSDVNVRVDDLQGMEKDAHRLYDLIRSQFMACQMTPAEYTS
TTITVTSGDYEFKAKGRILRFDGYTRAMQAVAKKGEDNILPDVGQGEYLTLKELLPEQHF
TKPVARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGDIVTERL
VDSFSSLMNFSFTAQMEEQLDDIAEGHKDWIKTLNAFYKDFSSVLAKAESPDGGMMPNEP
TPTDVECPTCSRPMQIRTASTGVFMSCSGYALPPKERCKATINLTRGDEAIPVDDEEGES
KALINKHRCKICGSAMDSYLMDEHRKLHVCGNNPACSGYEVETGAFKIKGYDGPTLECDK
CGSEMQLKTGRFGKYFGCTNEGCKNTRKLLKNGEAAPPKMDPVPMPDLACQKVDDHYVLR
DGATGLFLAASQFPRKRETRAPLVEELLPYMDQIDPKYHFFAKAPKKDSEGRPAIIRYSR
KTKEQYVMTEEEGKPTGWKAFYVGSKWVIEEGKKK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcactggttatcgtggaatcgccggctaaggcgaaaaccatcaacaaatac
ctgggcaacgactttattgtcaaatctagtgtcgggcacatacgtgacctgccttcaggt
acaactgccacctctacgcctcaagagcgagcaaagcaggctgctttgacgcgtaaaatg
agtccggaagaaaaacttgagtataaaagtagcaaagcgcgcaaacagttgatttctaga
atgggtgttgatccagaaagtaactggaaagctcattacgaaattctgccaggtaaagaa
aaagttgttgatgaactaaagcgtttagcaaaaaatgctgacaccatctatctcgcaacc
gatttggatagagagggggaggcaattgcttggcatttacgagaagccattggtggcgat
gatagccgctataagcgtgtagtatttaacgagattacaaaaaaagccattaaagctgcg
tttgaaaccccatctgaattagacatggatcgtgtaaacgctcaacaggctcgtcgtttc
ttggatcgagtagttggttttatggtgtcaccgctactttggtcaaaagtggcgagaggt
ttgtctgcggggcgagttcagtctgttgcagttcgtttgattgttgagcgtgaaaaagaa
attcgtgcatttgttcctgatgagttttgggaattagacgcaatgcttgcgacgccatcg
aaagaagttattaaattcgaggcagcaaaataccaagataaagaatatcgaccagtcaat
aaagcacagtcagatgagcacgtagctcgtttaaatgatgctaaataccttgtaagtagc
cgtgaagataagccgactagcagtaagccgtcagctccattcattacatctactcttcag
caagcagctagcactcgtttggggtatggcgttaaaaagaccatgatgctggctcagcgt
ctgtatgagggtggttacattacctacatgcgtactgattcgacaaacttaagtgttgat
gctgtagaggcgctaagaggatatatcctttctaaatttggcgaggcctatctgccagct
gaacctattcgatatagcagtaaagaaggtgctcaagaggctcacgaagcgattcgtcca
tctgatgtgaatgttcgagtagatgatttacagggtatggaaaaagatgcccatcgttta
tacgatttgatccgtagtcaatttatggcctgtcaaatgacaccagccgaatatacttcg
acaacaatcacagtaacttcaggcgattacgaattcaaagcgaaaggccgaattttacgt
tttgatggttacacgcgcgcgatgcaggcagtcgcgaaaaaaggtgaagacaacattttg
ccagatgttgggcaaggggaatatctgactcttaaagagttgttgccagaacagcatttt
accaagcctgttgctcgatttagtgaagcgagtttggttaaagagcttgaaaaacgtggt
ataggtcgtccttcaacttatgcttctattatttctacgatccaagatcgtggttatgtg
cgagttgaaaatcgtcgtttttatgcagaaaaaatgggcgatatagtaactgaacgtttg
gttgatagttttagttctttgatgaactttagctttacggcacaaatggaagagcagtta
gatgatatcgctgaagggcataaagactggattaagacacttaatgctttctataaagat
tttagttctgtacttgctaaagcagagtcgccagatggcggtatgatgccaaatgagcca
acgccgacagatgttgaatgtccaacttgttctcgtccaatgcagattcgtacagccagt
acaggtgtatttatgtcctgctctggttatgcgttaccaccaaaagagcgttgtaaagca
acgattaatctaacccgtggtgatgaggcgattcctgttgatgacgaagagggagaatct
aaggctctaatcaataagcatcgttgtaaaatctgtggttcagccatggacagctatttg
atggatgagcatcgcaaactacatgtttgtggtaataatccggcttgttctggttatgaa
gtcgagacaggtgcttttaaaattaaaggttatgatggtcctacattagagtgtgataaa
tgtggttcggaaatgcagctgaaaacgggtcgttttggtaagtattttggttgtactaat
gaaggctgtaaaaatactcgtaagttattgaagaacggcgaagctgcgccacctaagatg
gatcctgtgccaatgccagatcttgcttgtcaaaaagtagatgatcattatgtgcttcgc
gatggcgcaacgggtttattcttagcagccagtcaattcccacgcaagcgtgaaactcgt
gccccattggttgaagaattgcttccatatatggatcaaatagatcctaaatatcatttt
tttgccaaagcgcctaaaaaagattctgaaggtcgcccagccatcattcgatatagccgt
aagacgaaagagcaatatgtcatgacggaagaagaaggcaagccaacaggctggaaggca
ttttatgtcggctctaaatgggtgattgaggaaggtaagaaaaaatga
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