Marinomonas sp. MWYL1: Mmwyl1_2418
Help
Entry
Mmwyl1_2418 CDS
T00567
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
mmw
Marinomonas sp. MWYL1
Pathway
mmw02020
Two-component system
mmw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Mmwyl1_2418
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mmwyl1_2418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmw03021
]
Mmwyl1_2418
Transcription machinery [BR:
mmw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mmwyl1_2418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Phage_Coat_B
Motif
Other DBs
NCBI-ProteinID:
ABR71340
UniProt:
A6VY11
LinkDB
All DBs
Position
2725212..2726687
Genome browser
AA seq
491 aa
AA seq
DB search
MKQSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLKQEIHEFLESNPLLELDDDEQIHYDIP
ASIESKSAADTTVDNNSEEPRVESEWTESIPEELSIDSNWDDTYQSSAAVSDSNSYEGDS
DFESRNAPAESIQDHLIWQLNLTHMSDRDIEIAYAIIECVQPDGYLSISPDDICESLSIE
LEDLELDEVIAVQHRLQRFDPVGVCSIDLRDCLLVQLEAFQSHPLYKSTYNLIDHYLPLL
GNRDFAQLSRKTKLKDEALKEVVDLIQQLNPRPGSVIDADDTDYVIPDVTVKKRHDVWQV
ELNNDALPPIKINETYSAMVSTAAATAEDVTYIKTSLQEAKWFMKSLQSRNETLLKVASC
IVSRQIDFFELGEEAMKPMVLHDVAEEVGMHESTISRVTTQKYMHTPKGIFELKYFFSSH
VNTASGGECSSTAIRAMIKKLVSDEPAKKPLSDNKLAAILADQGIQVARRTVAKYREAMN
IPPSNERKRLI
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtctttacaattaaagcttggtcaacagctgactatgacgccacaactgcaa
caggctattcgcttgctgcagctttctacgttggatttaaaacaagaaattcatgaattc
cttgaatcgaatcccctgcttgagcttgacgacgacgaacaaattcattacgacatccca
gcaagcattgaatcaaaaagcgctgccgatacaacagtcgacaacaacagcgaagaacca
cgcgtagaatctgagtggactgaaagcatccctgaagaactatccatagatagtaactgg
gatgatacctatcaaagttccgccgctgtcagcgatagcaacagctatgaaggcgatagc
gacttcgaaagccgtaacgcaccagcagaaagcatccaagaccatcttatatggcaatta
aatttaacccacatgtcagatcgcgacattgaaatcgcttacgccatcattgaatgcgtg
cagccagacggctatctaagcatttcgcctgatgatatttgcgaatctctaagtattgaa
ttagaagacttagaattagatgaagtcattgcagtgcaacatagattgcaacgctttgac
cctgttggtgtgtgctcaatcgatctacgtgactgccttcttgtacaactagaagcattc
caaagccacccgctgtataagagcacatacaatcttattgatcattatctaccattatta
ggtaatcgagattttgctcagttgagccgtaagacaaaactaaaagacgaagccctaaaa
gaagtcgtcgatttgattcaacagctcaacccacgcccaggctcagttatcgacgctgac
gacacggattacgttattccagatgtcacagtgaaaaaacgccatgatgtatggcaagtg
gagctaaacaacgatgctttgccgcccatcaaaatcaatgagacctactcagcgatggtt
agcaccgcagcagcaacagcagaagacgtgacttacataaaaacctctcttcaagaagca
aaatggttcatgaagagcctacagagccgcaacgaaactttattaaaagtggcgagctgt
attgtaagtcgacaaattgatttcttcgaattaggcgaagaagccatgaaacccatggtt
cttcacgacgttgcagaagaagtaggcatgcatgaatcaactatttccagggtaacaaca
cagaaatacatgcatacgccgaaaggcatctttgagctgaaatactttttctccagccat
gtaaacactgcctctggcggagaatgttcttctaccgcaatacgagctatgattaaaaag
cttgtgtcagatgaaccggcgaaaaaaccgttaagcgataacaagctagctgctatttta
gcagaccaaggcatacaggttgctcgacgcactgtagccaaatatcgagaggcgatgaac
atccctccttccaatgaacgaaaacgactgatctaa
DBGET
integrated database retrieval system
