Marinomonas sp. MWYL1: Mmwyl1_2519
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Entry
Mmwyl1_2519 CDS
T00567
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mmw
Marinomonas sp. MWYL1
Brite
KEGG Orthology (KO) [BR:
mmw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmw03019
]
Mmwyl1_2519
Enzymes [BR:
mmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Mmwyl1_2519
Messenger RNA biogenesis [BR:
mmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Mmwyl1_2519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
WHD_HA2
AAA_22
AAA_19
nSTAND3
SRP54
T2SSE
ResIII
PhoH
SLFN-g3_helicase
nSTAND_NTPase5
ABC_tran
NACHT
Flavi_DEAD
AAA_25
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABR71438
UniProt:
A6VYA9
LinkDB
All DBs
Position
complement(2820334..2824260)
Genome browser
AA seq
1308 aa
AA seq
DB search
MNSTFSAPSKKDTSLLIMPTNAVMTRDRHLIDQKQVQLSKRQKDGLPFDRMQAELNALIE
KSETLYQARQSRMPKVTYDESLPVATRADEIIKAIQDNQVVIIAGETGSGKTTQLPKMCL
QAGRGIAGLIGHTQPRRIAARSVAERISDELQVNLGEQVGFQVRFSDESNEETLIKLMTD
GILLAEIQQDKRLYKYDTIIIDEAHERSLNIDFLLGYLKQVLAARPDLKVIVTSATIDVE
RFSEHFENAPIIEVSGRTYPVEIRYQPLLSKSDSEELDEDQSMEQGILDAVELLIAEERQ
SGYRGAGDILVFLPGEREIRDTAEILRRAELRSTEVLPLYARLSASEQQRIFKSHSGRRI
VLSTNVAETSLTVPGIRYVIDPGLARISRYSVRSKVQQLPIEKISQASANQRAGRCGRVA
DGICIRLYDEEDFNNRPEFTDPEIFRTNLASVILQMANLKLGAVEKFPFVEMPEKRMIND
GYRALTELGALHKERLTPIGRQLAKLPIDPKLGRILIAAEQHSVLKEVAIIVSALSIADP
RERPQDKKTQSDQAHAVDKDEDSDFLVFLNLWERFEEQRQALSQNQLRQYCRKQFLNFMR
MREWRDIHRQIMIACKQLGFKEVQHEERHYEAIHRALLAGMFTQVANKMEDSKEMLGCRS
RKLAIFPGSMLFKKPPQWIMAAELIETSKLYARVTARIDPAWIEEYAAPFVKRQYFDPHF
ERNQGRVMANEQVSLYGLIIVAKRRIDYGHVHPEDAREIFIRSGLVEGELRTKQAFFRKN
KALMELLEAQEAKLRKRDILVDDETVFAFYNSRLPDHVRNLKSLEHFVKTSPDALLMTRE
DLINQDVSVDDQAFPDSFGLNGVALPIDYKFDPGQAADGATLKVPVGLLRQLSLEDLGWA
VPGFIKERCEALLRALPKALRRRFVPIPQFVDRIYPNLSKDKGDLLEQLSLQIKRETLID
IPLNEWNADKLDSHLTLNLEVVDERGKVLGVGKNLAQLQTQFSDLVEESFAKFGTKQHEQ
EGLTSWPEQGIPERQEIKQAGIKVTAFPALVAQGDHVSLKMFDDQNTALETHRKGVVTLL
KLTLSKEMRYLQKNLPHLKESMLIFSPLGQKETLLDDLLNAVLDKVFLDGRALPRTKAEF
ESCLVKNKPQLVSVANDMAGQLYRVLSSYQGVAKRMKGSIPLPWTRIYGDIKVQLEQLIY
PGFIGNTPLFWLGQLPRYFKGIEVRLERFQNHLNKENQYVSELEILWQTYSRQKKAHDEK
ALYDPELIKYRWMLEEYRISLFAQSVGTLEPISEKRLNKQWQEVKKLV
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgaattctactttttctgcgccaagtaaaaaggatacaagtttacttatcatgcccact
aatgccgtaatgacgcgcgatcgtcatcttattgatcaaaaacaagtgcaattaagcaaa
cgtcaaaaagacggtttgccttttgatcgtatgcaagctgagctgaatgctctcattgaa
aaatcagaaaccctatatcaagctcgtcagtctcgcatgccaaaggtgacatacgatgag
agtttgcctgttgcgacacgtgccgatgaaattatcaaggcaatccaagacaaccaagta
gtgatcattgctggtgaaaccggttcaggtaaaaccacgcaattgcccaagatgtgtttg
caagcgggtcgaggtatcgctggattaattggtcatacgcaaccaagacgtattgccgcc
cgcagtgtggctgaacgtatcagtgatgagctgcaagtaaatcttggtgagcaagtaggt
tttcaggttcgttttagcgacgaaagtaatgaagaaaccctgattaagttgatgacagac
ggtattttgttggctgaaattcaacaagataaacgcctgtacaaatacgacaccatcatc
atagatgaagcccacgagcgtagtttgaacatcgatttcttgcttggctatttgaagcaa
gtcttggcagctcgacctgatctaaaagtcattgttacctcggcaaccatagacgttgag
cgtttttctgagcattttgaaaacgcgcctattatcgaagtgtctggtcgaacctaccca
gttgaaatccgttatcagcccttgctaagcaaatctgactctgaagaattagacgaagac
cagagtatggaacaaggcatcttagatgccgttgagctgcttatagcagaagagcgtcag
tcaggataccgaggcgcgggcgatatcttggtgtttttaccgggcgagcgagagattcgt
gataccgctgaaattcttcgtcgtgccgaattacgcagcacggaagtcctgcctttgtac
gcacgactaagtgccagtgagcagcagcgtatttttaaatcccattctggtcgtcgtatt
gtgttgtcgaccaacgttgctgaaacctcgttaacggtaccgggcattcgttatgttatt
gatccgggtttagcgcgaatcagccgctacagtgttcgttctaaagttcagcaattgccc
atcgaaaaaatcagccaagccagtgcgaaccaaagagcagggcgctgtggtcgtgtggcg
gatggtatttgtatccgcttatatgacgaggaagattttaacaatcgccctgagtttacc
gatccagaaattttccgtaccaatttggcgtcggttattttgcaaatggccaacctaaaa
ttgggcgcggttgaaaaattcccatttgttgaaatgccagagaaacgcatgatcaacgat
ggctatcgtgccttaacggaattaggagccttgcacaaagaacgcctaacgcccattggt
cgccagctggctaaattaccgattgatcccaagttaggacgtatcctgattgcagcggaa
caacacagcgtgttgaaagaggtcgctatcattgttagtgccttgtcgattgctgacccg
cgggagcgtccacaagataagaaaacccaatccgatcaagcccatgcggtggacaaagat
gaagattcggatttccttgtttttttgaatttatgggagcgctttgaagaacaacgccaa
gccttatcgcagaatcagttgcgccaatattgccgtaagcaatttttgaacttcatgcgc
atgcgtgaatggcgtgatattcatcgccaaatcatgattgcttgcaaacagcttggcttt
aaagaagtccagcatgaagaacgtcattacgaagcgattcatcgtgctttgttggcgggt
atgttcacgcaagttgcgaacaaaatggaagacagcaaagaaatgcttggctgtcgttcg
cgtaaattggcaatctttcctgggtctatgttattcaaaaaaccgccacaatggattatg
gcggcagagttaattgaaaccagtaaattatatgctcgagtgaccgcgcgtattgatcct
gcttggatcgaagaatatgccgcgccgtttgtgaagcgacagtactttgatccgcatttt
gagcgtaatcaaggccgcgttatggctaacgagcaagtatcactttatggtttgataatc
gttgctaagcgccgaattgattatggtcatgtgcatccagaagatgcgcgagaaatcttt
attcgctctgggctggtggaaggtgaacttcgtactaaacaggcgtttttccgtaaaaat
aaagctctgatggaattgttagaggcccaagaagctaagctgcgcaagcgtgacattctg
gtcgacgatgaaacggtgtttgccttctataattctcgattgcctgatcatgttcgtaat
ctaaaaagcttagagcatttcgttaaaacttcgcctgatgctttgttgatgacgcgagaa
gatttgatcaatcaagatgtcagtgtggatgatcaggcatttccagactcgtttgggttg
aatggtgtcgcattaccgattgattataaattcgatccaggacaggctgccgatggtgcg
accttaaaagtccccgttggtttgttacgtcaactgagcttagaggatttaggttgggcg
gttcccggctttatcaaagaacgctgtgaggcgttattgcgggctttgcctaaggctttg
cgtcgtcgctttgtgccgattcctcagtttgttgatcgtatttatcctaacttgtcgaaa
gacaaaggtgatttgcttgagcagcttagtttgcagattaagcgcgaaacgctgattgat
attccgcttaatgaatggaatgccgataagctagattctcacttaaccttgaacctagaa
gtggtggacgagcgcggtaaggtgcttggtgtaggtaaaaatcttgctcagcttcaaact
cagtttagcgacctagttgaagaaagttttgcaaaatttggtaccaaacaacatgagcaa
gaaggtttaacatcttggccggagcagggcattcctgagcgtcaggagattaaacaagct
ggaattaaggtcacggcgttccccgctttggtggcacaaggcgatcatgtgtcacttaaa
atgtttgatgatcagaacaccgcgctggaaacccatcgaaaaggggtggtcactttgctt
aaacttacactgagcaaagaaatgcgttatctgcaaaagaacctaccgcatcttaaagaa
tctatgctaattttttcgccattaggtcaaaaagaaaccttattggatgatttgcttaat
gcggtcttagacaaggttttcttggatgggcgtgctttgccccgcacaaaagcggagttt
gaaagttgcctagtgaaaaataaaccgcaattggtgagcgtggcgaacgatatggcagga
cagctttatcgcgtattgtcatcttatcaaggtgtggcaaaaaggatgaaaggcagtatt
cctctaccttggacacgaatttacggtgatattaaagtccaactagagcagcttatttac
cctggttttattggtaatacacccttgttttggttagggcaattaccgcgttattttaaa
ggtattgaagtgcgtttggagcgctttcaaaatcatctgaacaaagaaaaccaatatgtg
tctgaattagaaatcctttggcaaacttattctagacagaaaaaagcccatgacgaaaaa
gccttatatgatcccgagttgatcaaatatcgttggatgttagaggaatatcgtatttct
ttgtttgctcagtcggttggcacgttagagcctatttcagagaagcgcttaaataagcaa
tggcaagaagttaaaaaattggtttga
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