Marinomonas sp. MWYL1: Mmwyl1_2531
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Entry
Mmwyl1_2531 CDS
T00567
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mmw
Marinomonas sp. MWYL1
Brite
KEGG Orthology (KO) [BR:
mmw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmw03016
]
Mmwyl1_2531
Enzymes [BR:
mmw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mmwyl1_2531
Transfer RNA biogenesis [BR:
mmw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mmwyl1_2531
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ABR71450
UniProt:
A6VYC1
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All DBs
Position
complement(2832694..2833848)
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AA seq
384 aa
AA seq
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MNDQDGALNDDALNIVWVADNESLASWCDYWADLPVIAVDTEFIRRTTYFPITGLIQISE
GDKAVLIDPLSIDEWEPLRNLMVDPSVMKVFHACSEDLDVFDRLLGVLPTPFYDTQIGEA
YASAQWSLSYVKLIHEYLQIEVAKDETRSDWVQRPLTDAQKRYAALDVVYLAKVYPMQIA
RLEAKNMLGWVMEDCDSLKWQYQMNSDPEQNWDGIKTAWRLTPAGLTLLRLLFIWRDGQA
RKEDVPKGQILKDRTLWSLAKTLPTHHKAVSEAEELTGRQHRLYGEVILQNVALVNELSP
DEYQLPLEIPLPSQAGDLTKAIKAFIRDKAEMLNIAPEAMMKRKLLDPLVRHLYDGTEID
LQNPAMTGWRRDVIVDPILNRFKK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcaagatggtgctctgaatgatgacgctctcaatattgtgtgggttgcggat
aatgaatcgctggcgagctggtgtgattattgggccgatttgccggtaattgcggtcgac
acagaattcattcgtcgcacaacctattttccaataacggggctcattcaaatcagtgaa
ggcgataaagccgtactgattgatccattgagcatcgacgaatgggaacctctacgtaac
ctgatggtagacccttcggtgatgaaggtgtttcatgcttgttccgaagatttggatgtt
tttgatcgtttactaggtgttttacctacgcctttttacgatactcaaattggtgaagcc
tatgctagcgcgcaatggtcgctaagctatgtgaagttgattcatgagtatttgcaaatt
gaagtagcaaaagatgagactcgttcagactgggttcagcgtcctttaacggatgcgcaa
aagcgttatgcagcgcttgatgtggtgtatttggcaaaagtctatccaatgcagattgcc
cgtttagaagcgaaaaacatgcttggatgggtaatggaagattgtgattcattaaaatgg
cagtaccagatgaattctgatccagaacagaattgggatggaattaaaaccgcgtggcgt
ttgacgcctgctggtttaaccttattgcgtttgctgtttatttggcgcgatgggcaagct
cgtaaagaagacgtgcctaaagggcagatattaaaagatcgaactctttggtcattggcg
aaaaccttgccgacacatcataaagcggtttctgaggctgaagagttaaccggtcgtcag
caccgtttgtatggtgaagttattttgcaaaatgtcgctttggtgaatgaattgtcaccg
gatgaatatcaattgccgttggaaatccctttaccatctcaggccggtgatttaacgaaa
gcaattaaagcgtttattcgtgataaagctgagatgttgaatattgcaccggaagctatg
atgaagcgtaagctgttggatccattagtgcgtcatttgtacgatggtactgagattgat
ttgcagaatcctgcaatgactggctggcgtcgtgatgtgattgttgatcctatattgaat
aggtttaaaaaatag
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