Marinomonas sp. MWYL1: Mmwyl1_3217
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Entry
Mmwyl1_3217 CDS
T00567
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
mmw
Marinomonas sp. MWYL1
Pathway
mmw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mmwyl1_3217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmw03400
]
Mmwyl1_3217
DNA repair and recombination proteins [BR:
mmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mmwyl1_3217
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mmwyl1_3217
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
TrwB_AAD_bind
Viral_helicase1
DUF4665
Motif
Other DBs
NCBI-ProteinID:
ABR72123
UniProt:
A6W094
LinkDB
All DBs
Position
complement(3646533..3648560)
Genome browser
AA seq
675 aa
AA seq
DB search
MSQEFQVVSSYSPAGDQPKAIEKLVRGVEAGLAHQTLLGVTGSGKTYTIANVISQVKRPT
IVMAHNKTLAAQLYGEFKEFFPHNAVEYFVSYYDYYQPEAYVAASDTFIEKDASVNEHIE
QMRLSATKALLEREDVIIVATVSAIYGLGDPQSYLKMMLHLDRGDRIDQRDVLRRLAELQ
YSRNDLVLERGNFRVRGDVIEVFPADSEDTAIRIELFDDEVETLSMIDPLTNKTIRKVPR
VTIYPKTHYVTPKETVQAAIERIKVELDQRLEQLKSMNKLVEMQRLDQRTRYDLEMMQEL
GYCNGIENYSRYLSGREEGSPPPTLFDYLPANALLVIDESHVTVSQIGAMYKGDRSRKEN
LVEYGFRLPSALDNRPMRFEEWEQIKPQTIFVSATPGKYEEEHQDWVVEQIVRPTGLIDP
ILEVRPVATQVDDLLSEINLRTPIGERVLVTTLTKRMAEDLSDYLGDHGVRVRYLHSDID
TVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSEKSLIQTIGR
AARNVNGKAILYADRITGSMERAISETDRRREKQKAYNEEHGITPVGITKSVEDIMEGAY
NPGAGKRSNKTKKVAETAKDYQVESMEDVAQVRKAMIQLQKEMMLASEELKFELAAGYRD
QIRQLQRKLKDVGES
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcaagagtttcaggttgtttcatcttattcacccgcaggcgatcagccaaaggcc
atagagaaacttgttcgtggtgttgaagcgggcttggctcatcaaaccctgcttggggta
actggctcaggtaaaacttatactattgccaatgttatctcgcaagttaagcgcccaacc
atcgtcatggcgcataataaaaccttggcggcacagctttatggcgaattcaaagaattc
tttccccacaacgctgtcgaatattttgtttcttactacgattattaccaacccgaagct
tatgtggctgcgtcagatacctttattgagaaagacgcatcagttaacgagcacatagag
caaatgcgactgtcagcgactaaagccttgctagagcgtgaagacgttattattgttgct
acggtttcggcgatctatggtctgggcgaccctcaatcttacttaaaaatgatgttacat
cttgatcgtggggatcgtattgatcagcgtgatgtgttgcgtcgtttggcagaactgcaa
tatagccgcaacgatttggtattagagcgcggtaatttccgtgtgcgtggcgatgttatt
gaagtgtttccagcggactccgaagacaccgcgattcgtatcgagctattcgatgatgaa
gtcgaaaccttgtcgatgatcgacccgttgacgaacaaaaccattcgtaaagttcctcgg
gtgacgatttacccgaaaacccactatgtgacgccaaaggaaactgtacaagcggcaatt
gaacgtattaaagtggaattagatcaacgtcttgagcagcttaaatcgatgaataagctt
gttgagatgcagcgtcttgatcaacgaactcgatatgatttagaaatgatgcaggagtta
ggctactgcaacggcatcgaaaactactcgcgttatttgtcaggccgtgaagagggctca
ccaccaccaactttattcgattacctgccagccaatgctttgctcgttatcgacgaatct
cacgttaccgtgtcacaaatcggcgccatgtacaaaggcgatagatctcgtaaagaaaac
ctagtcgaatatggcttccgtttgccttctgccctagataatcgtcctatgcgatttgaa
gaatgggaacagattaaaccacagacaatctttgtgtctgcgacaccgggtaaatacgaa
gaagagcatcaggactgggttgttgagcaaatcgttcggccgactggcttgatagaccct
attttagaagtgcgacctgtggcgactcaggtggacgatttgctatccgaaattaatcta
cgtacaccgattggtgagcgcgtattagtgactactttaactaaacgcatggcggaagat
ttaagtgattatttaggtgatcatggtgtccgtgtgcgttatttgcactcggacatcgat
actgtcgaacgtgtagaaatcattcgtgatctgcgtcttggtgagtttgatgtgttagtt
ggtattaacttgctgcgagaaggcttggatattccagaagttagccttgtcgcaattctt
gatgctgacaaagaaggcttcttacgctcggaaaaatcacttattcaaaccatcggtcgt
gctgctcgtaacgtgaatggtaaagcgattttgtacgctgatcgtattacaggatccatg
gagagggcgatcagtgaaacggatcgtcgccgcgaaaaacaaaaagcgtacaatgaagag
catggtattacgccagttggtatcactaaatccgttgaagacatcatggaaggggcgtat
aaccccggtgctggcaagcgcagtaacaaaactaagaaagtggccgagactgcaaaagat
taccaagtggaaagtatggaagacgtggctcaagttcgtaaagccatgattcaactgcaa
aaagaaatgatgctagcctcggaagaattgaaattcgaattagcggcgggttatcgagat
cagattcgccagcttcaacgaaaattaaaagatgtcggcgaatcataa
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