Marinomonas sp. MWYL1: Mmwyl1_3760
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Entry
Mmwyl1_3760 CDS
T00567
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmw
Marinomonas sp. MWYL1
Pathway
mmw03410
Base excision repair
mmw03430
Mismatch repair
mmw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mmwyl1_3760
03430 Mismatch repair
Mmwyl1_3760
03440 Homologous recombination
Mmwyl1_3760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmw03400
]
Mmwyl1_3760
DNA repair and recombination proteins [BR:
mmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mmwyl1_3760
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mmwyl1_3760
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mmwyl1_3760
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Gene cluster
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Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Rhamnogal_lyase
Motif
Other DBs
NCBI-ProteinID:
ABR72661
UniProt:
A6W1T2
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Position
complement(4239748..4241580)
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AA seq
610 aa
AA seq
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MVLSLLKVSSWNWRQRECGYFHVILHLSVYPDFEIYMRIVRRAVPAEPNDFPSTMSATLQ
RVFLSRDVVSVAQLDYRLPHLLRPDSLFDLTTAAKILADAIVAGQKILIVGDFDADGATS
TSLGILALEAMGAIAPEYLVPNRFEFGYGLTPEIVEVAQERSPDVLVTVDNGIASIDGVL
AAKSYGMKVVVTDHHLPGDTLPNADAIVNPNHPNCGFPSKNLAGVGVIFYVMSALRAELN
SRNWFADQHIPEPKMADYLDLVALGTVADVVPLDANNRILVQQGIKRIQAGLARPGILAL
LEVGRRDYTQLKASDLGFVVGPRLNAAGRLDDMSIGIECLLAVHPHQARDYAQQLDQFNR
ERKAIESDMKEQAELVLESLLDEEQDMPNGMCFYDADWHQGVIGILASRMKDKCHRPVIA
FAKVGENELKGSARSIPGVHIRDALDLLAKRYPQLLSKFGGHAMAAGMSIKESHYEAFQL
AFDAIITEWVTPEQLEATLLTDGPLAPEDFSLSFAEQVRLSGPWGQMFPEPCFDGVFDIL
QQRIVGEKHLKLMVREPSSGLLLDAISFFVDLNQWPNDKVTQARLVYKLDVNEFRGQRNL
QLLVDYLEPA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggttttgtctttgctaaaggtttcatcttggaattggcggcagcgcgagtgcggctat
tttcatgttattcttcatctatctgtttatcctgactttgagatttatatgcgtattgtg
cgtcgagctgtacctgctgaaccaaatgactttccctcgactatgtctgcgactttacag
cgcgtttttttgtctcgtgatgtggtgtctgttgctcagcttgattaccgcttaccgcat
ttattaagacctgattctttatttgacctaaccacagcagcgaagatattagcggatgcc
attgttgctggtcagaagattcttatcgttggtgatttcgatgccgatggtgcaaccagt
acaagtcttgggattctagctttagaggcaatgggagcgattgccccagaatacttagtg
ccaaaccgttttgaatttggctatggacttacacctgaaattgttgaagtcgcacaagaa
cgatcaccagatgtcttggttacagttgataacggcattgccagtattgatggcgtgcta
gccgcaaaatcctatggtatgaaagtggttgtgaccgatcaccatttgcccggtgatacg
cttccgaacgccgatgctattgtgaacccaaatcatccaaattgcggctttccaagcaag
aacttagccggtgttggcgttattttttacgtgatgtcggctttaagagccgagttgaac
agccgtaattggtttgcagatcagcacattccagaacccaaaatggcagattatttggat
ttagtagcactcggaacggtggcagatgttgtgcctttggatgctaataatcgtattctc
gttcagcaaggcatcaagcgtattcaagcgggtttggcgcgtcctggtattcttgcttta
ttagaagtagggcgtcgtgattatactcaattgaaagcatctgatttgggatttgtggtc
ggaccaagattgaacgcggcaggtcgtttagatgatatgtcgattggtattgagtgtttg
ctggcagttcatcctcatcaagcacgcgattatgcgcagcagttggaccaatttaatcga
gagcgcaaagccattgaatccgatatgaaagaacaagctgagttggtgttggagtctttg
ctagatgaagagcaagacatgccaaatggtatgtgtttttatgacgcggattggcatcag
ggggtcattggtattttggcttcgcggatgaaagataaatgccatcgtccagtgattgct
tttgccaaagtcggtgaaaatgaattaaaaggttcagcgcgttccatccccggcgttcat
attcgtgatgcgttggacttattggccaagcgttatccgcagttgcttagtaaatttggc
ggtcatgccatggcggcaggcatgtcgatcaaagaatcccactatgaagcgtttcaattg
gcatttgatgccataattaccgagtgggtaacgccggaacagcttgaggcgacactgcta
actgatgggccattagcaccagaagattttagtttaagctttgctgagcaagttcgtttg
tctggcccgtgggggcagatgtttcccgaaccttgttttgatggtgtttttgatattttg
cagcagcgtatagttggtgaaaagcaccttaaacttatggtgcgtgaaccgagcagtggt
ttgttattggatgcaatcagtttttttgtagacttaaatcaatggccaaatgataaagta
acgcaagctcgtttggtttataagctagatgtgaatgagtttcgcggtcagcgtaatctc
cagttgttagtcgactatttagaacccgcatag
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