Marinomonas sp. MWYL1: Mmwyl1_4251
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Entry
Mmwyl1_4251 CDS
T00567
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mmw
Marinomonas sp. MWYL1
Pathway
mmw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mmwyl1_4251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmw03021
]
Mmwyl1_4251
03400 DNA repair and recombination proteins [BR:
mmw03400
]
Mmwyl1_4251
Enzymes [BR:
mmw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mmwyl1_4251
Transcription machinery [BR:
mmw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mmwyl1_4251
DNA repair and recombination proteins [BR:
mmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mmwyl1_4251
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ABR73146
LinkDB
All DBs
Position
complement(4825932..4826936)
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVSELLTPRNIEVQELGNCRAKVTLQPLERGFGHTLGNALRRILLSSMPGCAIVEVE
IDGVLHEYSAIEGVKEDVIEILLNLKGVAIALHGQDEATLTLSKKGPGIVTAGDIQLVAD
AEIANPDHIIAHLDDTAELTMQIKVARGRGYEPADARVAGDDETRPIGRLQLDASFSPVR
RVAYSVDNARVEQRTDLDKLVLDIESNGTIDPEEAIRRAATILQQQIAVFVALESESEAP
VVEEEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLAQRGLSLGMRLENWPPASLKDDSKVLAR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgagcgaattgttaaccccacgcaacattgaagttcaggaactaggc
aactgtcgcgctaaagttacactgcaaccgctagaacgtggttttggtcatactttgggt
aacgcgttgcgccgtatcctgctttcttcaatgccaggttgtgcgattgttgaagttgaa
atcgacggtgtattacacgaatacagcgcaatcgaaggggttaaagaagatgtaattgaa
attcttcttaacctgaaaggagttgcgatcgctctacacgggcaagatgaagcaactctt
actctaagtaaaaaaggtcctggtatcgtaacagctggagatatccagttggttgctgat
gcagagatcgctaacccggatcatatcattgcgcacttagatgacactgctgagttaact
atgcagatcaaagttgcacgtggccgtggttatgagcctgctgatgctcgtgttgctggc
gacgatgagactcgtccaatcggtcgcttgcaactggatgcctcattcagccctgttcgc
cgtgttgcgtacagtgtcgataatgctcgtgtagagcagcgtacagatttagataagtta
gtcttagacatcgaatctaatggtactatcgatcctgaagaagcaattcgtcgtgcagcg
actattttacaacagcaaattgccgtgttcgtcgcccttgaaagcgagagcgaagcgcct
gttgtagaagaagaggatgagattgatccaattttgctacgcccggttgatgatcttgaa
ttgaccgttcgcagtgctaactgtttaaaagcagagaacatttattacatcggtgatttg
attcaacgtactgaggttgagcttcttaagacgcctaacctaggtaagaagtcgttaact
gaaatcaaagatgttttagcacagcgtggtttgtctttgggaatgcgtctagaaaattgg
ccaccggctagtttaaaagacgatagcaaagttctagctcgctag
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