Methanococcus maripaludis C6: MmarC6_0345
Help
Entry
MmarC6_0345 CDS
T00615
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmx
Methanococcus maripaludis C6
Pathway
mmx03410
Base excision repair
mmx03430
Mismatch repair
mmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MmarC6_0345
03430 Mismatch repair
MmarC6_0345
03440 Homologous recombination
MmarC6_0345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmx03400
]
MmarC6_0345
DNA repair and recombination proteins [BR:
mmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MmarC6_0345
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MmarC6_0345
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MmarC6_0345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ABX01166
UniProt:
A9A757
LinkDB
All DBs
Position
complement(308657..309952)
Genome browser
AA seq
431 aa
AA seq
DB search
MDILPIEDISKFNQITGKIKEKIENYDGLIRIVTHHDPDGLTSGSIVLKTLIRLNKNAQM
TILEHLSKESIEELAKENDKMFIFCDMGSGQIEFINNFGFNAIILDHHPPKVAETEIGDI
LQLNPHIFGANGAKEISASGVCYLIARLFGYYDLAPVAIVGAIGDMQHLPFIGLNKYILN
EARKYRYLSVIKDIVYNCYNLPISKSIYYSTQPYIRELSSIDKIKEIFDELKINPEKKGI
TAKESENLLECFKKFNKNDELMVDRYEINHKINDAFYLSEVLNACGRKEMTAVGIGILLG
DDECIKQGEKLNVEYKEELMEELKNVKLNSMDNIEYFIGEKGKTGIIAALMVKDKPVLGF
NEQGEIYKVSSRGSKELVECGLNLSEAMAVSREFGGDGGGHNIASGAAIQKNYLNEFLEK
VNEIVGGQLKR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatatactgcctattgaagatatttctaaatttaatcaaattactggaaaaataaaa
gaaaaaattgaaaattatgatggattgataagaattgtaacgcaccacgatcctgatggg
cttacatccggttcaatcgtacttaaaacacttattcgattaaataaaaatgcacaaatg
actattttggagcatttatcaaaagaatctatcgaagaactcgcaaaagaaaacgataaa
atgtttatattttgtgatatgggaagcggtcagattgaatttataaataattttggattt
aatgcaataattcttgatcatcaccctccaaaagtggctgaaactgaaattggagatatt
ttgcagttaaatcctcatatttttggtgcaaatggtgcaaaagagatttctgcaagtggg
gtatgttatttaattgcaagattgtttggatattatgatttagcacctgttgcaattgtt
ggggcaattggagacatgcagcacttgccatttattggattgaataaatatattttaaac
gaagcgagaaaataccgttatttgagtgttataaaagatatcgtttataattgttacaat
ttaccgatttcaaagtcgatatattattcaactcaaccatatatccgagaattaagtagt
atcgataaaataaaagagatttttgatgaattaaaaataaatcctgaaaaaaaaggaata
actgcaaaagaatcggaaaatttgctcgaatgttttaaaaaatttaacaaaaatgacgag
ttaatggtcgataggtacgaaataaatcataaaataaacgatgcgttttacctttcagaa
gttttgaatgcatgcggtagaaaagagatgactgcggttggaattggaattttgcttggg
gacgatgaatgtattaaacaaggcgagaaactgaatgtcgaatacaaagaagaattaatg
gaagaattaaaaaatgtaaaattaaattcaatggataatatcgagtattttatcggtgaa
aaaggaaaaactggaataattgccgcattaatggtaaaagataagccagtacttggattt
aatgaacagggcgaaatttataaggtttcttcaagaggaagtaaggaacttgttgaatgt
gggttaaatctttcagaagcaatggcagtatcaagagaatttggtggagatggtggtgga
cacaacattgcatccggtgcagccatccaaaagaattatttaaatgaatttttggaaaaa
gtcaatgaaatcgttggtggacagttaaaacgttag
DBGET
integrated database retrieval system
