Methanococcus maripaludis C6: MmarC6_0990
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Entry
MmarC6_0990 CDS
T00615
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmx
Methanococcus maripaludis C6
Pathway
mmx03410
Base excision repair
mmx03430
Mismatch repair
mmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MmarC6_0990
03430 Mismatch repair
MmarC6_0990
03440 Homologous recombination
MmarC6_0990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmx03400
]
MmarC6_0990
DNA repair and recombination proteins [BR:
mmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MmarC6_0990
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MmarC6_0990
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MmarC6_0990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
DHH_CID
DUF6327
Motif
Other DBs
NCBI-ProteinID:
ABX01805
UniProt:
A9A8Y2
LinkDB
All DBs
Position
936771..938174
Genome browser
AA seq
467 aa
AA seq
DB search
MEYLINLKKAVKLLRKNRDKRILVCTHIDTDGINSRIILEKVLERLNIEAEFLFLRQIDY
GTIDTIPFDSDLIIFADLGSGQIDLINEKLEELSKKPKIIILDHHFISNERIPENIVNVN
PHNNGIDGGKEICGAGVCYLFAKICDPRFTDLAKYAVLGAVGDVQSLEGNLIGLNRDVIL
KDAINAGDISVSPDLQFYGKHTRPLFTSIKYFTDVRTDLTDNDSRIINFINNVNRKHGTD
IIPKDYMCDLTFEQKKILGSEFLHKCSRYIPPDWRIHLPKVIFGESYELVNEEFKSNLKN
LEEFSTCINGCSRYDEYEVPLEVLKGDRDKNYSKMLRMLKKHKRNLAGSMDFLRNEVEIV
QKENFQYFEVDKNAINGNIVGIVAGMSYSLEKVDWKKPIFAVSEVDNGYKVSARCPKLLS
FAQDINLATAINYASKKVGGSGGGHKFACGAYIPEIGDFVSYLEEKL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaatatttaattaatttaaaaaaagcagttaaattacttagaaaaaatcgggacaaa
agaatactagtttgtactcacatcgatactgacggtataaattccagaattattttagaa
aaagtgctcgaaagattgaatatcgaagcggaatttctatttttaaggcagattgactac
gggacaatcgatacaattccatttgatagtgatttaataatatttgcagaccttgggagc
ggccagattgatttaataaacgaaaagttagaagaactctcaaaaaagccaaaaataatt
attttagaccaccactttatctcaaatgaaagaatccccgaaaatattgtaaatgtaaac
cctcacaacaatggaattgacggtggaaaagaaatttgtggtgcaggagtttgctatctt
tttgcaaaaatatgcgatcctcgttttaccgatcttgcaaaatatgcagttttaggggct
gttggagacgttcagagtcttgaaggaaatttgattggattaaatcgagatgtaatttta
aaagatgcaattaatgccggagatatttcagtaagtccagatttacagttttacgggaag
catacgaggccgctttttacttcgattaaatattttacggacgttaggacggatcttact
gataacgattctcgaataattaactttataaacaatgtaaacagaaagcacggaaccgac
ataattccaaaagattacatgtgtgacctcacatttgaacagaaaaaaatcctgggaagt
gagtttttacacaaatgcagtcgatacattcctccagactggagaatacaccttccaaag
gttatatttggggagagttacgagctagtaaatgaagaatttaaatcaaatctaaagaat
ctggaagaattttcaacctgtataaacggatgttcgagatacgatgaatatgaagttcct
ctcgaagttttaaaaggagatcgggataaaaactacagtaaaatgcttagaatgctcaaa
aaacacaaaagaaatctagcaggttcgatggattttttaagaaacgaagttgaaatagtt
caaaaagaaaacttccagtactttgaagtagataaaaatgcaataaacggaaacattgtt
ggaattgttgcaggaatgagctattctcttgaaaaggtcgactggaaaaagccaattttt
gcagtttctgaagtagataatggatacaaggtttcagcaagatgtccaaagttgttatcg
tttgcacaggatataaatcttgcaactgcgataaactacgcttctaaaaaggttggtgga
agtggtggtggacacaaattcgcttgtggagcatatatcccagaaattggagattttgtt
agctatctcgaagaaaaattataa
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