Methanococcus maripaludis C6: MmarC6_1627
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Entry
MmarC6_1627 CDS
T00615
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
mmx
Methanococcus maripaludis C6
Pathway
mmx03030
DNA replication
mmx03420
Nucleotide excision repair
mmx03430
Mismatch repair
mmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MmarC6_1627
03420 Nucleotide excision repair
MmarC6_1627
03430 Mismatch repair
MmarC6_1627
03440 Homologous recombination
MmarC6_1627
03460 Fanconi anemia pathway
MmarC6_1627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmx03000
]
MmarC6_1627
03032 DNA replication proteins [BR:
mmx03032
]
MmarC6_1627
03400 DNA repair and recombination proteins [BR:
mmx03400
]
MmarC6_1627
Transcription factors [BR:
mmx03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MmarC6_1627
DNA replication proteins [BR:
mmx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MmarC6_1627
DNA repair and recombination proteins [BR:
mmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MmarC6_1627
MMR (mismatch excision repair)
MmarC6_1627
DSBR (double strand breaks repair)
HR (homologous recombination)
MmarC6_1627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Rep_fac-A_C
Ssb-like_OB
DUF3127
DUF5088
FYVE
Zn_Ribbon_TF
DZR_2
OB_MEIOB_N
DUF2536
Motif
Other DBs
NCBI-ProteinID:
ABX02439
UniProt:
A9AAR6
LinkDB
All DBs
Position
1521077..1523005
Genome browser
AA seq
642 aa
AA seq
DB search
MNIDKLKQKILSKINQEELEKKVNEKIEENSGLLGEESAVMLVAQELGIEITYGDDEEEY
DFTINDIADGQKNVEVTGKIIEISPAKEFNRKDGSTGKLASITIGDNTGITRLTLWNDKT
DLIEGLKKGDVVKIENAFSRKWNDKVELNSGSELSIDKLKKYDESRYPILKENYKISELM
PNLSGTINAEVVAAYPKKEFNRKDGTNGQLKSLILKDDTGSIRGTLWNELADFEVKKGDI
AEVSGYVKQGYSGLEISVDNIGIVEESVKEEKSVEKMNISELASFDGEYVTISGNVANIS
GSREVQFSDRTAEVQDIYLNDGTGMVKIAFWGANRNILNDLKEGDYLNVSNCKLRTYTDN
TGEKRADLTYNYMSELKKDETASEKIVEKITAIGDILSGSADSSDLTVIGMVTNAYPVNE
FSRSNGGTGKVRNIQLDDSTGSIRMALWDSDAEIEISEGDVVKLIHGFAKESGEYMDLST
GRFGRIEVNPEGISIKSPRNYIADLEEGVSTEISGTVVDYRKQDVILSLCPNCRKRVSLV
DNKYTCEVCGEVTPNELLVSNLTIDDGTGVINCRIYGNNVEKVTELSKNKIKEMNLDALS
NVLGKDVLFYGTPSFRNDDLEFAVKRVNFVDASKELEVLKQL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgacaagttaaagcaaaaaatattatcaaaaattaaccaagaagaactcgaa
aaaaaagtaaacgaaaaaattgaagaaaattctggacttctaggtgaagaaagtgcagta
atgctggttgcgcaggaacttgggatagaaataacatatggggatgatgaagaggaatat
gattttacaatcaatgatattgctgacgggcagaaaaatgttgaagttactggaaaaatc
attgaaatttcgcctgccaaggaatttaaccgaaaagatgggtcaactggaaaacttgca
tcaattactattggggataatactggaattacaagacttacgctctggaacgacaaaaca
gatcttatcgaaggacttaaaaaaggagacgttgtaaaaattgaaaatgcatttagcaga
aaatggaatgacaaagttgaattaaatagtggttcagaactttcaattgacaaacttaaa
aagtacgatgaatcccgatatcctattttaaaagagaattataaaatttcagaattaatg
cctaatttatcagggacaattaatgcagaagttgttgcagcataccctaaaaaagaattt
aaccgaaaagatggaacaaacggccagctaaaatcattgatattaaaagatgacactgga
agtatacggggaaccctctggaacgaacttgcagattttgaagttaaaaaaggagatatt
gcagaagtaagtgggtatgtgaaacaaggttattctggacttgaaatttctgtagataat
attggaattgttgaagagtctgtcaaagaagaaaaatctgttgaaaaaatgaacatttct
gaacttgcaagttttgatggagaatatgtgacaatctctggaaatgttgctaatatttcg
ggttcaagagaagttcagtttagtgatagaactgcagaagttcaagatatttatttaaat
gacggaaccggaatggtaaaaattgcattttggggtgcaaacagaaatattctcaacgat
ttaaaggaaggggattatttaaacgtttcaaactgtaaattaagaacttacactgataat
actggcgagaaaagggctgatttaacttataattatatgtcggaacttaaaaaagatgaa
actgcaagcgaaaaaatagttgaaaaaataacggctattggagatatcttaagcggtagt
gcagatagctctgatttgacggttattggaatggttacaaatgcatatccggtaaacgag
ttttcgagaagtaacggtggaactggaaaagttagaaacatccagttagatgacagcact
ggaagcataaggatggctctatgggatagtgacgcagaaattgaaatttcagaaggtgac
gttgtaaaattaatacatggatttgctaaagaaagtggcgagtacatggatctgtcaact
ggaaggtttggtagaatcgaagtaaaccctgaaggaatttcaataaaatctccaagaaat
tacattgcagatcttgaagaaggtgtttcaactgaaatcagtggaactgttgtagattac
agaaaacaggatgtaattcttagtttatgtccaaactgtagaaaaagagttagtttagtt
gataataaatacacgtgtgaagtttgtggggaagttactccaaacgaacttttagtttca
aatttaacgattgacgatggaactggtgttatcaactgcagaatatatggaaacaacgtt
gaaaaagtaacagaactttcaaaaaataaaataaaagaaatgaatttagatgctctttca
aatgtgcttggaaaagatgttttattctatggaacaccttcatttagaaatgatgacttg
gaatttgcagtaaaaagagttaatttcgtagacgcatcaaaagaattggaagttttaaaa
caactctaa
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