Mycoplasma mycoides subsp. mycoides izsam_mm5713: mycmycITA_00103
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Entry
mycmycITA_00103 CDS
T03541
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
mmyi
Mycoplasma mycoides subsp. mycoides izsam_mm5713
Pathway
mmyi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmyi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
mycmycITA_00103 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmyi03400
]
mycmycITA_00103 (xseA)
Enzymes [BR:
mmyi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
mycmycITA_00103 (xseA)
DNA repair and recombination proteins [BR:
mmyi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
mycmycITA_00103 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF5344
Sod_Fe_N
Motif
Other DBs
NCBI-ProteinID:
AIZ54934
UniProt:
A0AAE2EHL4
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All DBs
Position
complement(120001..121410)
Genome browser
AA seq
469 aa
AA seq
DB search
MEKILTVQELNEALKTLIENKQEFKDIYVQGELSNLTFNKSGHIYFSIKEQDAAINCMMW
KTNAYKIQSLNLEDGMQIICYGRLTYYIPTGRVSFEVRDIQIHGIGDLQKIFEQRYKELE
QKGWFDPNLKKSIPEFVKNVGIITADSGAAIYDLIRTVHRRLPLINIYLFPAQVQGDKAE
IDITNKIKQANNFKIDLDVLIVGRGGGSYEDLWAFNELEVLQAIKNSHIPIISAVGHEPD
WVLSDYVADIRAATPTAAGELVSKSIIEIKNQLKHYYQNYKTLILNKLDFFNEKINNYKK
DQTKYIKDNFSFKYLQLKQLSIDNTKWTKNKIDSVIYKLEDYKHSINNSIIHIINSQNKA
LKNYLIADEQKILNYLKKQISEFNYTISSFKGHINQILKYEELSFDTLENKLNSLDPLKP
LQNGYSIVTNLNHQKIRSYKQVKLNEDLKVILTDSKLTVTIKEVKTNEQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattttaacagttcaagaattaaacgaagccttaaagactctgattgaaaac
aaacaagaatttaaagatatctatgtacaaggtgaattgtctaatttaacttttaataaa
tctggtcatatttatttttctattaaagaacaagatgctgctattaattgcatgatgtga
aaaactaatgcatataaaatacaatctttaaacttagaagatggtatgcaaataatttgt
tatggaagattaacttattacattccaacaggaagagttagttttgaagtaagagatatt
caaattcatggtattggtgatttacaaaaaattttcgaacaaagatacaaagaattagaa
caaaaaggttgatttgatccgaatttaaaaaaatcaattcctgaatttgttaaaaacgta
ggaattattacagctgattcaggagctgcaatttatgatttaattagaactgttcataga
agactgcctttgattaatatttatttatttcctgctcaagttcaaggagataaagcagaa
attgatattacaaataaaataaaacaagctaacaattttaaaattgatttagatgttttg
attgttggaagaggtgggggaagttatgaagatctttgagcttttaatgaattagaagtt
ttacaagcaataaaaaatagtcacattcctataatcagtgctgttggtcatgaacctgat
tgagttttatcagattatgtagctgatattagagcagcaacaccaactgctgctggagaa
cttgtaagtaaaagcattattgaaattaaaaatcagttaaaacattattatcaaaactat
aaaacattaatattaaataaattagatttctttaatgaaaaaataaataactataaaaaa
gatcaaaccaagtatataaaagataatttttcttttaaatacttacaattaaaacaatta
agtatagataatactaaatgaacaaaaaataaaatagattctgtaatttataaactagaa
gattataaacattctataaataattcaattatacatattattaattcacaaaataaagct
cttaaaaattacttaattgcagatgagcaaaaaatacttaactatttaaaaaaacaaata
agtgaatttaattacacaatatcaagttttaaaggacacattaatcaaatattaaaatat
gaagagttaagttttgatacacttgaaaataaacttaattcattagatcctttaaaacct
ttacaaaacggatatagcatagttactaatttaaatcatcaaaaaataagatcatataaa
caagttaaactaaatgaagatctaaaagttattctaactgatagtaaactaacagtcact
ataaaagaggtgaagacaaatgaacaataa
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