Mycoplasma mycoides subsp. mycoides izsam_mm5713: mycmycITA_00506
Help
Entry
mycmycITA_00506 CDS
T03541
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mmyi
Mycoplasma mycoides subsp. mycoides izsam_mm5713
Brite
KEGG Orthology (KO) [BR:
mmyi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
mycmycITA_00506 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmyi03021
]
mycmycITA_00506 (rpoD)
Transcription machinery [BR:
mmyi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mycmycITA_00506 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HAUS-augmin3
Lant_dehydr_N
MLKL_N
Motif
Other DBs
NCBI-ProteinID:
AIZ55330
UniProt:
A0AAE2EHJ8
LinkDB
All DBs
Position
539638..541158
Genome browser
AA seq
506 aa
AA seq
DB search
MTKFNNKSELKKIASFNDFLDYTVSFANKNNNEISSEDVLEVFANIFPNASDNESEKILD
VLQQKGIVFSDLVDDDIEQEELEEVEEEIEDLNLEELEELENLEYLDDLDFDLDSTSNNL
DDYDENANDDLDEFKEAKSAAIKGRKSAKSSNHMKYRVGGISNETKIQDIIKTYFYKIGQ
APILTKEQEIIYAKMAVSDDPEDVQEGRNKLIESNLKLVISVARKHLNRGLDFADLIEEG
NIGLMKAVDKFEYEKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLARVER
QLTQELGREPNADEIANRVGEGITGDKVIEIKKLSIEPVSLEKPFGDEDDTHFGDFVEDK
DMVSPNEYTEKEILKEVMDKVFEDMPPREEKVIRMRYGIVPTRLRTLLRLTQECNDTNAK
ELKQAIEELDIHLDTPIEKVRKFNNQIINNNLAKYDSARTLEEVGKELNVTRERIRQIEA
KTIRKLKQPSPNNKSGKTLKEFYKGY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatttaataacaaatcagaattaaaaaagattgcttcatttaatgatttttta
gattatacagtttcatttgctaataaaaataataatgaaatttcatctgaagatgtatta
gaagtttttgcaaacatttttccaaatgcatcagataatgaatcagaaaaaatattagat
gttttacaacaaaaaggaatagttttttcagatttagtagatgatgatattgaacaagaa
gaactagaagaagtagaagaagaaattgaagatcttaatttagaagaactagaagaatta
gaaaatttagaatatcttgatgatttagattttgatttagatagtacttcaaataattta
gatgattatgatgaaaatgctaatgatgatttagacgaatttaaagaagcaaaaagtgca
gctataaaaggtagaaaatcagctaagtcatcaaatcatatgaaatatcgcgttggtggt
attagtaatgaaactaaaattcaagacattattaaaacttatttttataaaataggtcaa
gcaccaattttaacaaaagaacaagaaataatatatgctaaaatggcagttagtgatgat
cctgaagatgtacaagaaggtagaaataaattaatcgaatctaacttaaaactagttatt
tctgttgctagaaaacatttaaaccgtggattagattttgcagatttaattgaagaagga
aatattggtttaatgaaagctgttgataaatttgaatatgaaaaaggatttaaattttca
acttatgctacttgatgaattcgtcaagcaataacaagagctattgctgatcaagcaaga
actattagaattccagttcacatggttgaaacaattaataaattagcaagagttgaacgt
caattaactcaagaattaggaagagaacctaatgctgatgaaattgctaacagagttggt
gaaggaattactggtgataaagttattgaaattaaaaaactttcaattgaaccagtaagt
ttagaaaaaccttttggtgatgaagatgatactcattttggagattttgttgaagataaa
gacatggtttctccaaatgaatatactgaaaaagaaattttaaaagaagtaatggataaa
gtttttgaagatatgccaccaagagaagaaaaagtgattagaatgagatatggaattgtt
ccaacaagactaagaactttattaagacttactcaagaatgtaatgatacaaatgctaaa
gaattaaaacaagcaattgaagaattagatattcatttagatacaccaattgaaaaagtt
agaaaatttaataatcaaatcatcaataataatttagcaaaatatgattcagctagaact
ttagaagaagttggaaaagaattaaatgttactagagaaagaatcagacaaattgaagca
aaaactattagaaaattaaaacaaccatcaccaaacaataaatctggaaaaacattaaaa
gaattttataaaggatattaa
DBGET
integrated database retrieval system
