Mycoplasma mycoides subsp. mycoides SC Gladysdale: MMS_A1035
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Entry
MMS_A1035 CDS
T02595
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
mmym
Mycoplasma mycoides subsp. mycoides SC Gladysdale
Pathway
mmym03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMS_A1035 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmym03400
]
MMS_A1035 (uvrB)
DNA repair and recombination proteins [BR:
mmym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMS_A1035 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MMS_A1035 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_7
AAA_30
Cas3-like_C_2
DPPIV_rep
nSTAND3
AAA_16
AAA_19
UvrD-helicase
DUF2009
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ADK70007
LinkDB
All DBs
Position
complement(1077972..1079969)
Genome browser
AA seq
665 aa
AA seq
DB search
MFIANNKYKLVTKYKPSGDQNQAIEKLNKAIIENKKHQVLLGATGTGKTFTIANIIAKHN
KQALVIAHNKTLAMQLYYELKEMFPENRVEYFVSNFDFFQPEAYIPSKDLYIDKDSRQNM
ELDMMRLSACNALLTRNDTIVVASVAALFALQNPLEYSSAFIELKVGQKIKRNELLTWLV
RSGYTRNDIENQLGSFSAKGDVVKIVPGWVNNIMFRISLFDDEIESIHTLNTITNSILDN
ITTVTIHPAQSYITPQDKLKTICNNIRNELVQRLAELQSENKLLEAQRLEQRTKYDLESL
EEFGFCSGIENYSSHLDFRSKGQRPYVLLDYFNNDFITIVDESHITLPQIRGMYNTDRSR
KLTLVEYGFRLPSALDNRPLNFDEFNSLIKQVIYTSATPGDYELDLVNHQVVQQIIRPTG
LLDPQIEIRKTTNQIDDIINEIHLRKLQNERVFITTLTIRMSEDLTAFLQEKNIKVAYLH
SELKTLERSEILNDLRKGVYDVVVGVNLLREGLDLPEVSLVCILDADKQGFLRNYRSLIQ
TIGRVARNVNGKAIMYADTVSQAMDEAIKETNRRRKIQEEFNKKHNIVPKTISKAISESI
LSEQTKKTLAKAKKIKDKKQKLQTIQQTIDNLRQEMLQAAKELDFERAAILRDTIIELEN
EKNTN
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtttatagcaaataataagtacaaactagtaactaaatataaaccttcaggtgatcaa
aatcaagctatagaaaaattaaataaagcaattatagaaaacaaaaaacaccaagtgtta
ttaggagcaacaggtactggcaaaacttttacaatagcaaatattattgcaaaacataat
aaacaagctttagtaattgcacataataaaactttagcaatgcagctttattatgaatta
aaagaaatgtttccagaaaatagagttgaatattttgtttcaaactttgattttttccaa
ccagaagcttatatcccttcaaaagatttatatattgataaagattctagacaaaatatg
gaattagatatgatgcgtttaagtgcttgtaatgctttattaacaagaaatgatactata
gtagtagctagtgttgctgctttatttgctttacaaaatcctttagagtattcttcagct
tttattgaattaaaagttggtcaaaaaattaaaagaaatgaattattaacttgactagta
agatctggatatactagaaatgatattgaaaatcaattaggaagcttttcagcaaaaggt
gatgttgttaaaattgttcctggttgagtaaataatattatgtttagaatttcattattt
gatgatgaaatagaaagtattcatactttaaatacaattacaaattctattttagacaat
attacaactgttactattcatcctgctcaatcatatataactccacaagacaaattaaaa
acaatttgtaataatattagaaatgaattagttcaaagattagctgaattacaatcagaa
aacaaacttttagaagctcaaagactagaacaaagaactaaatatgatcttgagtcactt
gaagaatttggcttttgtagtggaattgaaaattattcttcgcatttagattttagatct
aaaggtcaaagaccatatgttttattagattattttaataatgattttataactatagtt
gatgaatctcatatcacacttcctcaaattagaggaatgtataatactgatagatcaaga
aaactaactctagttgaatatggttttagactaccatcagctctagataacagaccttta
aattttgatgaatttaatagtttaattaaacaagtaatttatacttcagcaacacctgga
gattatgaactagatttagttaatcatcaagtagttcaacaaattattcgtccaactgga
ttattagatccacaaattgaaataagaaaaacaaccaatcaaattgatgatattattaat
gaaattcatttaagaaaattacaaaatgagcgtgtatttattactactttaactattaga
atgagtgaagatttaactgcttttttacaagaaaaaaacattaaagttgcttatttacac
tcagaattaaaaactctagaacgtagtgaaattttaaatgatctaagaaaaggggtttat
gatgttgttgttggagttaacttattaagagaaggattagatctacctgaagtgagttta
gtatgtattttagatgcagataaacaaggttttttaagaaattaccgttctttaattcaa
actattggtcgtgttgctagaaatgttaatggtaaagctattatgtatgctgatactgtt
agtcaggcaatggatgaagcaattaaagaaactaatagaagaagaaaaatccaagaagaa
tttaataaaaaacacaatattgttccaaaaactatttcaaaagctattagtgaatctatt
ttaagtgaacaaactaaaaaaacattagctaaagctaaaaaaattaaagataaaaaacaa
aaacttcaaactatccaacaaactattgataatttgcgtcaagaaatgttacaagcagca
aaagagcttgattttgaaagagcggcaattttaagagatacaattattgaattagaaaat
gaaaaaaatacaaattag
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