KEGG   Myotis myotis (greater mouse-eared bat): 118656495
Entry
118656495         CDS       T07220                                 
Symbol
CPSF4
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 4
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
mmyo  Myotis myotis (greater mouse-eared bat)
Pathway
mmyo03015  mRNA surveillance pathway
mmyo05164  Influenza A
Brite
KEGG Orthology (KO) [BR:mmyo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118656495 (CPSF4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    118656495 (CPSF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmyo03021]
    118656495 (CPSF4)
   03019 Messenger RNA biogenesis [BR:mmyo03019]
    118656495 (CPSF4)
Transcription machinery [BR:mmyo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     118656495 (CPSF4)
Messenger RNA biogenesis [BR:mmyo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     118656495 (CPSF4)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_3 Torus zf-CCCH_2 zf-CCHC zf-CCCH_12 zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_DUS3L zf-C3H1 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 118656495
NCBI-ProteinID: XP_036165852
LinkDB
Position
Unknown
AA seq 270 aa
MQEIIASVDHXVKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRH
ISGEKTVVCKHWLRGLCKKGDQCEFLHEXDMTKMPECYFYSKFGECSNKECPFLHIDPES
KIKDCPWYDRGFCKHGPLCRHRHTRRVTCVNYLVGFCPEGPSCKFMHPRFELPMGTTEQP
PLPQQTQPPSKQSNNPPLQRSSSLLQLTSQNSSPSQQRAPQVIGVMQSQNSSAGNRGPRP
LEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq 813 nt   +upstreamnt  +downstreamnt
atgcaggaaatcatcgccagcgtggaccattaggtcaagttcgacttggagatcgcggtg
gagcagcagctcggggcgcagccgctgcccttccccggcatggacaagtcaggggcggct
gtctgtgaattctttttgaaagctgcctgtggcaaagggggcatgtgcccgtttcgccac
attagtggtgagaagacagtggtgtgcaaacactggctgcgggggctgtgcaagaagggg
gaccagtgcgagttcctccatgagtaggacatgaccaagatgcctgagtgctacttctac
tcaaagtttggggagtgcagcaacaaggagtgccccttcctgcacatcgaccccgagtcc
aagatcaaggactgcccttggtacgatcgtggcttctgcaagcacggtcccctgtgtagg
caccggcacacgcggagagtcacctgtgtgaattacctggtgggattctgcccggagggg
ccctcgtgtaaattcatgcaccctcgatttgaactgccaatgggaaccaccgagcagcct
ccactgccccagcagacgcagcctccgtcaaagcaaagtaacaatccgccattacaaagg
tcgtcctccttgctccagttaacgagccagaactcttctcccagtcagcagagagccccg
caggtcatcggggtcatgcagagtcaaaacagcagcgcaggcaaccggggaccccgccca
ttggagcaggtcacctgttacaagtgtggtgaaaaaggacactacgccaacagatgcacc
aaagggcacttggcctttctcagtggacagtga

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