Myotis myotis (greater mouse-eared bat): 118657671
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Entry
118657671 CDS
T07220
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1 isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mmyo
Myotis myotis (greater mouse-eared bat)
Pathway
mmyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118657671 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmyo03019
]
118657671 (XAB2)
03041 Spliceosome [BR:
mmyo03041
]
118657671 (XAB2)
Messenger RNA biogenesis [BR:
mmyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118657671 (XAB2)
Spliceosome [BR:
mmyo03041
]
Complex B
Other components
Prp19-related factors
118657671 (XAB2)
Complex C
118657671 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_NPHP3
TPR_1
Motif
Other DBs
NCBI-GeneID:
118657671
NCBI-ProteinID:
XP_036167889
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
VDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATQAVEPAQQYEMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAEHDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcatggcgcgactttcgcggcaggagcggccggaccttgtctttgatgaagaa
gacctcccctatgaggaggaaattatgcggaaccagttttctgtcaaatgctggctccgc
tacattgagttcaagcagggggccccgaagcccaggctcaatcagttgtacgagcgcgcg
ctgaagctgctgccctgcagctacaaactctggtaccgctacctgaaggcacgcagggcc
caggtgaagcatcgctgtgtgactgatcctgcctatgaagatgtcaacaactgccacgag
agggccttcgttttcatgcacaagatgccacgtctatggctagattattgtcagttcttg
gtggaccagggccgtatcactcacacacgccgcactttcgaccgtgccctccgggcgctg
cctatcacacagcactctcgtatttggcctctgtacttgcgcttcctgcgctcacacccg
ctacctgagacagccgtgcggggctaccggcgcttcctcaagctgagccctgagagtgca
gaggaatacatcgagtacctcaagtcaagtgaccggctggacgaggctgcacagcgcctg
gccaccgtggtgaatgatgagcgcttcgtctccaaggctggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccggacaaggtgcagtcgctcaacgtg
gacgccatcatccgagggggccttacccgcttcacagaccagctgggcaagctctggtgt
tcactggccgactactacatccgcagtggccattttgagaaggctcgggacgtgtacgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgtttgacagctatgcc
cagttcgaggagagcatgattgcagcgaagatggagaccacctcggagctggggcgggaa
gaagaggatgacgtggacttggaactgcgcctggcccgctttgagcagctgatcagtcgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccgcaccatgtccatgagtgg
cacaagcgtgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacggag
gctgtgcagacagtggaccccttcaaggccacgggcaaaccccatacgctgtgggttgca
tttgccaagttttatgaggacaacgggcagctggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaggtggatgacctggccagcgtgtggtgcgagtgtggg
gagctggagctccggcatgagaactacgaccaggccttgcggctgctgcggaaggcaaca
gcactgcccgcccgccgggctgagtattttgatggctcggagcctgtgcagaaccgtgtg
tacaaatcattaaaggtgtggtccatgcttgccgacttggaggaaagccttggcaccttt
cagtctaccaaggctgtgtatgaccgtattctggacctgcgcatcgctaccccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tatgagcgtggcatctcgctgttcaagtggcccaatgtgtctgacatctggagcacctat
ctgaccaaattcatcgcccgctatgggggccgtaagctggagcgggctcgggacctcttt
gagcaggcgctggatggttgcccccccaaatatgcaaagaccctgtacctgctgtacgca
cagctggaggaggagtggggcctggcccggcacgcaatggccgtgtacgagcgcgccacc
caggccgtggagcccgcccagcagtacgagatgttcaacatctacatcaagcgggcagcg
gagatctatggagtcacccacacccgtggcatctaccagaaggccattgaggtgctgtcg
gacgaacacgcccgggagatgtgcctgcggtttgcggacatggagtgcaagcttggagag
attgaccgcgcccgggccatctacagcttctgctcccagatctgtgaccctcggacaact
ggggccttctggcaaacatggaaggacttcgaggtacggcatggcaatgaggacaccatc
cgggagatgctgcgtatccgccgaagcgtgcaggccacttacaacacacaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagtgctacaggcactgtgtctgaccttgcc
cccgggcagagtggcatggatgacatgaagctactagagcagcgggcagagcagctggca
gccgaggccgagcacgaccagcccccacgggcccagagcaagatcctgttcgtgaggagc
gatgcgtcccgggaggaactggctgagctagcgcaacaggccaacccggaggagatcgag
ctgggcgaggacgaggacgaggatgagatggacctggagcccaatgaggtgcggctggag
cagcagagtgtgccggctgctgtgtttgggagcctgaaggaggactga
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integrated database retrieval system
