Myotis myotis (greater mouse-eared bat): 118661848
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Entry
118661848 CDS
T07220
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mmyo
Myotis myotis (greater mouse-eared bat)
Pathway
mmyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118661848 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmyo03041
]
118661848 (PRPF40A)
Spliceosome [BR:
mmyo03041
]
Complex A
U1 snRNP components
U1 related factors
118661848 (PRPF40A)
Complex B
118661848 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
118661848
NCBI-ProteinID:
XP_036176199
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MQATPSEPEAGGESPQSCVSESHSDWTAGKPVSLLAPLIPPRSAGQPLTFGPSGRQPLRS
LLVGICSGSGRRRSSQSPMMRPGTGAERGGLMVSEMESHPPAQGPGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGVHYASMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDLTAGTTGTKSMWTEHKSPDGRTYYYNTE
TKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQ
NTIVAGSLITKSNLHAMIKAEESSKQEECTTASTAPVPTTEIPSTMSTMAAAEAAAAVVA
AAAAAAAAAAAANASASTSANTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLT
TTPAVQDQNVDSNAGEETSKETVADFTPKKEEDESQPAKKTYTWNTKEEAKQAFKELLKE
KRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKES
FQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQL
RKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIR
ALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRF
TNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAI
ISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIE
LDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHH
RKRSRSRSGSDSDDDDSHTKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHK
SDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSSGNWDTSGSELSEGE
LEKRRRTLLEQLDDDQ
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagtgagcctgaggcagggggcgaatcgccgcagagctgcgtgtcg
gaatcgcactctgattggacagcgggaaagcctgtcagcctactggccccgctgatcccg
ccccgtagtgccgggcagcctttaacctttggccccagcgggcgccagccactcagatcg
cttcttgttggcatatgcagcggcagtggccgccggcggagcagtcagagcccgatgatg
aggccggggacgggagccgagcgtggaggcctcatggtgagtgaaatggagagccatcct
cccgcgcagggtcctggggacggggagcggagattgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcatcctggcgtg
cattatgcctcaatgggaatgcaccctatgggtcagagagcgaatatgcctcctgtacca
catggaatgatgccacaaatgatgcccccaatgggaggtccaccaatgggacaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgccaggagtaaataatatggatttaacagcaggtacaacaggcaca
aaatcaatgtggactgaacataaatcacctgatggaaggacttactactacaatactgaa
acaaaacagtctacttgggagaaaccagatgatcttaaaactcctgctgagcaactttta
tctaaatgcccctggaaggagtacaagtctgactctgggaagccatactattataattct
caaacaaaagaatcccgttgggccaaacccaaagaacttgaggatcttgaaggataccag
aataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagct
gaagaaagcagtaagcaagaagaatgcaccacagcatcaacagccccagttcctacaaca
gaaattccttccacaatgagcaccatggctgctgcagaagcggcagctgctgttgttgca
gctgctgcagctgctgcagcagctgctgctgcagccaacgccagtgcctccacctctgct
aatactgtcggtggaactgttcctgttgtacctgagcctgaagttacttcaattgttgct
actgttgtagataatgaaaacacagtaaccatttcaactgaagaacaagcacaacttact
actacccctgctgttcaggatcaaaatgttgacagtaatgctggagaagaaacatctaag
gaaactgtagctgattttactcccaagaaagaagaggatgaaagccaaccagcaaaaaaa
acatatacttggaatacaaaggaggaggcaaagcaagcatttaaggagttattgaaagaa
aagcgggtaccatctaatgcttcatgggagcaagctatgaaaatgattattaatgatcca
cgatacagtgctttagcaaagttgagtgaaaaaaagcaggcctttaatgcctataaagtt
cagacagagaaagaagaaaaagaagaagcaagatcgaaatacaaagaggctaaggaatcc
tttcagcgttttcttgaaaatcacgagaaaatgacctccacaaccagatacaaaaaagca
gagcaaatgtttggcgagatggaagtctggaatgcaatatcagagcgtgatcgtcttgaa
atctatgaagatgttttattctttctttcaaaaaaagaaaaggagcaagcaaagcagttg
cgaaaaagaaattgggaagccttaaaaaacatacttgacaacatggctaatgtaacatat
tctactacttggtctgaagcccagcagtatttgatggataatccaacttttgcagaagat
gaggaattacagaacatggataaagaagatgcattaatttgctttgaagaacacattcgg
gctttagaaaaggaggaggaagaagaaaaacaaaagagtttgctgagagaaaggcgacga
cagcgtaaaaatagagaatcttttcagatatttttagatgaattgcatgaacacggacaa
ctacattctatgtcttcttggatggaattgtatccaacaattagttctgacattagattc
actaacatgcttggtcagcctgttttttcattaggatcaactgcacttgaccttttcaag
ttttatgttgaggatcttaaagcacgttatcatgatgagaagaagataataaaagatatt
ctaaaggataaaggatttgtagttgaagtaaatactacttttgaagattttgtggcaata
atcagttcaactaaaagatcaaccacattagatgccggaaatattaaattggcttttaat
agtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggaggctcgaaag
atgaaacgaaaagaatctgcatttaagagtatgttgaaacaagctgctccccctatagaa
ttggatgctgtctgggaagatatccgggagagatttgtaaaagagccggcatttgaggac
ataactctagagtctgaaagaaaacgaatatttaaagattttatgcatgtgcttgagcat
gaatgtcaacatcatcattcaaagaacaaaaaacattctaaaaaatctaaaaaacaccac
aggaaacgttcccgctctcgatcggggtcagattcagatgacgacgacagccatacaaag
aaaaaaagacagcgatcagagtctcgttctgcttcagaacattcttctagtgcagagtct
gagagaagttacaagaagtctaaaaaacataagaagaaaagcaagaagaggagacataaa
tctgactctccagagtcagatgctgagcgagagaaggataagaaagaaaaagaccgggaa
agtgaaaaggacagaactagacaaagatcagaatcaaaacacaaatcacctaagaaaaag
actggaaaggattcttctggtaattgggatacttctggcagtgaactgagtgaaggagaa
ttggaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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