Myotis myotis (greater mouse-eared bat): 118679564
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Entry
118679564 CDS
T07220
Symbol
SKIV2L
Name
(RefSeq) helicase SKI2W isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
mmyo
Myotis myotis (greater mouse-eared bat)
Pathway
mmyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118679564 (SKIV2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmyo03019
]
118679564 (SKIV2L)
Enzymes [BR:
mmyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118679564 (SKIV2L)
Messenger RNA biogenesis [BR:
mmyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118679564 (SKIV2L)
mRNA degradation factors
3'-5' decay
Ski complex
118679564 (SKIV2L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
118679564
NCBI-ProteinID:
XP_036212338
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MMETERLVLPPPGPLDLPLRAVELGCTGRWALRNVRGAPESTLPHGLPPCAPDLQQEAEQ
RFLSSPAWLPLHGLEHSARKWQRKMDPWSLLTVLGAPVPSDLQAQRQPTTGQILGFKEVL
LENTDLSATTSLSLRRPPGPISQSLWGNPTQYPFWPGGMDEPTLTELSTREEAEEEIDFE
KDLLTVPPGFKRGVDFAPKDHPVPAPGLLSLSRLLEPLDLGGGDEDEREAVGQPGGTRGD
TVPASPCSAPVARASSLEDLVLKEASTAVSPSEPPKPLPQEQWAVPVDVTSPVGDFYRLV
PQPAFQWPFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVVST
AARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGNAFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMVDLHRMMTGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKKLGALEEPDLTGQLVDLPEYYSWGEELTETRSLIQVSRDAGRRRGRQGG
TLGAPELVPASLTASFIRVHIPAPQRRVMESVNGLKSLSAGRVVVVKTQEHHNALGVILQ
VSSNSTSRAFTALVLCDKPVSEDPRERRSASPGVPYPEDLVGFKLFLPEGPCDHTVAKLQ
PGDVAAITTKVLRVNGEKILEDFSRRQQLKFKKDPPLAAVTAAAQELLRLAQAHPTGPPT
LDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRFPAQYLKLQERRQLQKEIERLR
FLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSSHELLLTELMFDNALS
ALRPEEIAALLSGLVCQSPGDTGEQLPSTLKQGVERVRAVAKRIGEVQVACGLNQTVEEF
VGELNFGLVGVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV
LGAKMETAATLLRRDIVFAASLYTQ
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacggagcgactcgtgctgcctcccccgggccccctggacctgcctcttcgg
gctgtggagctgggatgcactgggcgctgggcgctgcggaatgtgcggggggctccggag
agcacgcttccccacggcctccctccctgtgccccagatctgcagcaagaagccgagcag
cggttcctgtcgtcgccagcctggctgcctctgcatggcctggagcactcagctcgaaaa
tggcagaggaagatggatccttggtccctccttactgtcctgggggccccagtcccctcc
gacctgcaagcccagagacagccaaccacgggccagatactgggcttcaaggaggtcctg
ctggagaatacagacctgtcggccaccacctccttatctcttcgccggccaccagggccc
atctcccagtccttgtgggggaatccaacacagtaccctttctggccaggtgggatggat
gagcccaccctcacagagctgagcacccgggaggaggctgaggaggagatagactttgag
aaagacctccttaccgttccacctggcttcaagagaggtgtggactttgcaccaaaggat
cacccagttccagcgcctgggctgctcagcctcagccgtctgctagagcccctggatctg
ggtgggggcgacgaagacgagagggaggcagtgggacagccaggaggtaccagaggagac
actgtcccagcctctccctgcagtgctcccgtggccagagcaagcagcttggaggaccta
gtgttgaaggaagcgtccacagctgtgtccccttcggagccccccaagcccctccctcag
gagcagtgggccgttcctgtggatgtcacctcccccgttggcgacttctaccgcctcgtt
ccccagccagccttccagtggccatttgagcctgatgtgttccagaaacaggccatcctg
cacctggaacggcacgactcggtgtttgtggcggcgcacacatctgcagggaagacggtt
gtggccgaatacgccattgcccttgcccagaagcacatgacgcgcaccatctacacttcc
cctatcaaggctctgagtaaccagaagttccgagacttccgaaacacattcggggacgtg
gggctgctcacgggggacgtccagctgcacccagaggcctcctgcctcatcatgacgaca
gagatccttcgctccatgctgtacagcggctcagacgtcatccgggacctggagtgggtc
atcttcgatgaggttcactacatcaacgacgctgagcgtggggtcgtgtgggaggaggtg
ctcatcatgcttcctgaccatgtctccatcatccttctgagtgccactgtccccaacgcc
cttgagtttgctgactggattggacgactgaagcgccgccagatctacgtggtcagcact
gccgcccgccccgtgccgctggagcattatctcttcacggggaacagccccaagacccag
ggggagctcttcctgttgctggactcgcgaggcgccttccacacaaaggggtactatgca
gctgtggaggccaagaaggagaggatgagcaaacacgcccagacctttggggccaagcag
cccacgcatcagggggggcctgcacaggaccgcggtgtgtacctgtccctcctggcctcc
ctccgcacccgtgcgcagctgcccgtggtggtgttcaccttctcccggggccgctgtgat
gagcaggcgtcgggcctcacctccctggacctcaccacgagctcagagaagagcgagatt
cacctgttcctgcagcgctgccttgctcgcctccgcggctctgaccggcagctgccccag
gtgctgcacatgtcggagctcctgcaccgaggcctgggcgtgcaccacagcggcatcctg
cccatcctcaaggaaattgtggagatgctcttcagccgcggcctggtcaaggtcttgttc
gccacagagacctttgccatgggtgtcaacatgccagcccgaacggtggtgtttgactcc
atgcgaaagcacgacggcaacgccttccgggacctgctccccggggagtacgtgcagatg
gcgggccgcgcgggccgcaggggcctggaccccacgggcaccgtcatcctgctctgcaag
ggccgcgtgcccgagatggtggacctgcaccgcatgatgacgggtaagccatcgcagctg
cagtctcagttccgcctcacgtacaccatgatcctcaacctgctgcgggtggacgccctc
agggtggaggacatgatgaagaggagcttctctgagtttccgtcccgcaaggacagcaag
gcccacgaacaggctctggctgaattaaccaagaagctgggggccttggaggagcctgac
ctgactggccaactggtggacctgcccgagtattatagctggggagaggagctgacagag
acccgcagcttgatccaggtcagcagggatgcgggcagacggaggggaagacagggcggc
actctgggtgcccccgaactggtccctgcatccctgactgcctccttcatccgtgtgcac
atccccgctcctcagcgacgtgtcatggagtctgtcaacgggctgaagtctctctcggcc
gggagggtggtggttgtgaagactcaggagcatcacaacgcactgggtgtgatcctgcag
gtctcctcgaactccaccagcagggcattcaccgctctggtcttgtgtgataaacccgtg
tctgaggacccacgggagaggcgctcggcctccccaggtgtgccctacccagaggacctg
gtgggattcaaactgttcctgcctgaagggccctgtgaccacactgtggccaagctccag
cccggagacgtggctgccatcaccaccaaagtgctccgggtgaacggggagaagatcttg
gaggacttcagcaggaggcagcagctgaaattcaagaaagaccctcccctcgctgctgtg
accgctgctgcccaggaattgctgcgcctggctcaggcccacccgacaggaccccctacc
cttgaccctgtcaacgacttgcagcttaaggatgtgtcagtggttgaggggggactccgg
gcccggaagctagaggagctgatccggggggctcagtgcgtgcacagcccccgtttccct
gcccagtacctgaagctgcaggagcgaaggcagctacagaaggagatagagcggctgcgc
ttcctgctgtcagaccagtcgctgctgctgctccccgagtaccaccagcgagtagaggtg
ctccgaactctgggctatgtagacgaggcgggcacggtgaagctggcggggcgcgtggct
tgtgccatgagcagccatgagctgctcctcaccgagctcatgttcgacaacgctctgagt
gccctgcggccggaggagatagcagccctgctctccggcctggtctgccagagccccggg
gacactggggagcagctcccaagtaccctcaaacagggagtggaacgtgtccgcgctgtg
gccaagcggattggtgaggtccaggtggcctgtggcctgaaccagacagtggaagaattt
gtaggggagctgaatttcgggctggtcggggttgtgtacgagtgggcccggggcatgccc
ttctcggagttggcagggctctcggggacgcccgagggcctggtggtccgctgcatccag
cgcctggccgagatgtgtcgctcactgcgaggggcggcccgcctggtcggcgagcctgtg
ctgggtgccaagatggagacggcagctaccctgctgcggagggacatcgtctttgcagct
agcctctacacgcagtga
DBGET
integrated database retrieval system
