Maritalea myrionectae: MXMO3_01343
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Entry
MXMO3_01343 CDS
T05588
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mmyr
Maritalea myrionectae
Pathway
mmyr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmyr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MXMO3_01343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmyr03021
]
MXMO3_01343
Transcription machinery [BR:
mmyr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MXMO3_01343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
DUF4168
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AVX03874
UniProt:
A0A2R4MD70
LinkDB
All DBs
Position
1359847..1361832
Genome browser
AA seq
661 aa
AA seq
DB search
MATKAKENEKQEGSAEAQDGPLLDLSASSVKKMIRAAKKRGYVTYEVLNEVLPSDQVSSE
QIEDVMAMLSEMGISVIEEDEAEEREAEKESSSTELTVATGTAVASKSNAREGSDRTDDP
VRMYLREMGTVELLSREGEIAIAKRIEAGRETMIEGLCESPLTFQAIIIWREQLAEGEIL
LRDIIDLEATYAGPDAKEEPTIPAEGETNKPAEEKTAEEKPDEGGENSDDDDDDDEFENN
LSLSAMEAELKPQVVETFDLIANTYAKLRKLHDEQVEQKLASSTLTDKQLKKLNSLKAEV
IAEVKSLSLHNGRIEALVEQLYDINKGLVRIEGRLLRLAESYGIQREDFLTEYHGNELAP
DWVDTISTLPKPGWTNFAVAERDMIEELREEIKTLATETGMDISEYRKIVHKVQKGEREA
AIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYAT
WWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELSEKLQMPLD
KVRKVLKIAKEPISLETPIGDEEDSNLGDFIPDSNAVQPIDSAIQSNLRETTTRVLASLT
PREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLD
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaaggctaaggaaaacgagaagcaggaaggcagcgccgaagctcaagacggt
ccgctcctcgatctttccgcatcatctgtaaagaaaatgattcgggccgccaagaagcgt
ggctatgtcacttatgaagtgctcaatgaggttttgccctccgatcaggtttcttcagag
cagattgaagatgtgatggcgatgctctctgaaatgggcatttccgtgatcgaagaagat
gaagccgaagagcgcgaagctgaaaaagaatccagcagcaccgagcttacagttgcaacc
ggcaccgccgttgcgtctaaatccaacgcccgtgaaggttcagaccgcacggacgatccg
gtgcgcatgtatttgcgcgaaatgggcacagtggagctgttgtctcgcgaaggcgagatt
gcgattgcaaaacggattgaagctggtcgtgaaaccatgatcgaagggctttgcgaaagc
cccttgaccttccaggcgattattatttggcgcgagcagttggccgaaggcgaaattttg
ctgcgcgacattatcgatctggaagcgacttatgctggcccagacgccaaagaagagcca
accattccggcagaaggcgagaccaataagccggctgaggaaaaaacggctgaagaaaag
cctgacgaaggcggcgaaaacagcgacgacgatgatgatgatgacgagtttgaaaacaac
ctctcattgtcagccatggaagctgagcttaagccgcaggttgttgaaacctttgatctg
attgcgaacacttacgccaagttgcgcaagttgcatgatgagcaggttgagcaaaagctg
gcctccagcacgctgaccgacaaacagttgaaaaagctgaactcgctgaaagctgaagtg
attgcggaagtgaagtcactttccctgcacaatggccggattgaagcgctggttgaacag
ctttatgacatcaacaaaggtttggtgcgcattgagggccgtttgctgcgtttggcggaa
agctatggcattcagcgcgaagactttttgaccgaatatcacggcaacgagctggcgccg
gactgggtggataccatttccacactgccaaagccgggctggaccaactttgctgtggcc
gagcgcgacatgattgaggagttgcgcgaagaaatcaaaacccttgccactgaaacgggc
atggacatttctgaatatcgcaagattgtgcacaaggtacaaaaaggtgagcgcgaagcc
gccattgcgaaaaaagaaatggttgaggcgaacttgcgcctcgtgatttcgattgcgaaa
aaatacacaaaccgtggtttgcaattcctggatctgatccaagagggcaatattggtttg
atgaaggcggttgataagtttgaatatcgccggggctataaattctcgacttatgccaca
tggtggattcgtcaggcgatcacccgctcaattgcggaccaggcgcgtacgatccgtatt
ccggtgcatatgatcgaaacgatcaacaaaatcgttcggacatcgcgtcagatgttgcac
gagattggacgcgagccgacaccagaggaattgagcgaaaagctgcaaatgcctttggat
aaggtgcgcaaagtgctgaagatcgcgaaagagccgatttctttggaaacgccaattggc
gacgaagaagacagcaatttgggcgattttatcccggattcaaacgcggtgcagccgatc
gactctgcgatccaatccaatttgcgtgaaaccacaacacgggttttggcgtcactgaca
cctcgtgaagaacgtgtgttgcggatgcgctttggtatcggcatgaacaccgaccatacg
cttgaagaagtgggccagcagttcagcgtgactcgggaacgtatccgtcagatcgaggcg
aaggccttgcgcaaactgaagcacccaagccgcagccgcaaactgcgtagcttcttggat
agctaa
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