Maritalea myrionectae: MXMO3_02151
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Entry
MXMO3_02151 CDS
T05588
Name
(GenBank) uvrABC system protein
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mmyr
Maritalea myrionectae
Pathway
mmyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MXMO3_02151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmyr03400
]
MXMO3_02151
Enzymes [BR:
mmyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MXMO3_02151
DNA repair and recombination proteins [BR:
mmyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
MXMO3_02151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
Helicase_C
CarD_TRCF_RID
UvrB_inter
ResIII
MFD_D3
Cas3-like_C_2
AAA_25
SecA_DEAD
RecG_dom3_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AVX04671
UniProt:
A0A2R4MF50
LinkDB
All DBs
Position
complement(2089961..2093452)
Genome browser
AA seq
1163 aa
AA seq
DB search
MADHSDNFSLTPSKYLCGVPDGMQPIVVSQQLEALQAAAPNDPATVFVARDGRRMQKMAD
HLRHLCPNHEVLLFPAWDCLPYDRVSPNAAVLAERMTALAQLAPGKNGGKVVVTTVNAIV
QKTVPPSLINQFALFFKVGENIGTEKLIEWANVNGYLRVPTVREQGEFAVRGGLVDLYPA
GAEAPLRFDFFGAALETIRTFDPETQRTLAQQRSAALVPMSEVVLTPEAISNFRRAYTRQ
FGGDTANDPFYAAISAGQRFAGMEHWLPFFYSEMGNLGDFTGEATWILDDQVSQSIAERM
VQVADYYEARHEALSEPQTGGAPYKPLPPDLLYDLQTDTTEWLGTKLYQVTPFQTLERPD
AEITSLDGQLVANFSQERQAKDTNVFEAVLHRIKAKQAEGKRAVIACWSEGTRDRMAQVL
KDHEHENLKLIQFWQQAEDLSKNAIGLIVLGLESGFETKNHYVLSEQDILGERIIRSRKR
KKGAEAITEASGLAADDLVVHVDHGIGRFVGLKAIEVTGAPHDCVEIEYAKGDRLYLPVE
NIELLSRYGSEGGAGVLDKLGGVAWQAKKSKLKQRIREMAEQLIKVAAARELTKGDVIEP
TTGLYEEFCARFPFEETDDQLNAIDSVFEDLTSGRAMDRLVCGDVGFGKTEVALRAAFAV
AMTGKQVAVVVPTTLLARQHYKTFKERFADLPVRVRQASRLVSAKELKATKEGIASGDVD
IVIGTHALLGKSIKFHDLGMLVIDEEQHFGVGHKERLKELKSSVHVLTLSATPIPRTLQM
ALTGVRDLSILATPPIDRLSVRSFVMPFDSLVIREALLREKYRGGQSFYVVPRIKDQADI
ARFLDEHVPEVSYVVANGQMSPGELDDIMNAFYDGKFDILVATTIVESGLDIPTANTLVV
HRADNFGLSQLHQIRGRIGRSKVRAYALFTTPAHQKLTDTATRRLSVLQSLDSLGAGFQL
ASHDLDIRGAGNILGEEQSGHIKEVGFELYQAMLEEAVAQLKTGAEDDEVEDQWSPQISL
GMPVMIPEAYVPDLQVRMQLYRRLGDLTEAQEIDAFGAELIDRFGPLPEEVKHLLKIVLV
KSLCRRANVEKVDAGPKGAVITLRNGEFPNPALLVQLIANPAEKAKVRPDQKLVFARNWP
DNNKKLTGAARILSQLAKLAEQG
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcacagcgacaacttcagcctgacacccagcaaatatctttgcggcgtgccc
gatggcatgcaacccattgtcgtgagccaacagcttgaagccttgcaagcagcggcgccg
aacgacccggccaccgtttttgtcgcgcgcgatgggcgacgcatgcaaaaaatggccgat
catttgcgccatctttgccccaaccatgaggtattgctgtttcccgcttgggattgcttg
ccttatgaccgcgtatcccccaacgcagccgtcttggcggaacgaatgaccgcacttgcg
caattggcgccgggcaaaaatggcggcaaagtcgtggtgactactgtcaatgcgatcgta
cagaaaactgttccgccatcattgatcaatcaattcgccttgttcttcaaagtcggcgaa
aatatcggcaccgaaaaactgatcgaatgggcaaacgtcaatggctatttgcgggtgcca
actgtacgcgaacagggcgagtttgccgtgcgcggtggcttggtcgatctttatccggcg
ggggcagaggcgcccttgcgctttgatttttttggcgcagcgcttgaaaccatccgcacc
ttcgatcctgaaacccagcgcacattagcgcagcaacgctcagcagcactggtcccgatg
agcgaagttgtgctcacgcccgaggctatttccaactttcgccgggcctatacccgtcag
tttggcggcgacacggcaaatgatccgttttatgcagcgatcagcgccggacaacgtttc
gcgggcatggagcattggttgcccttcttttatagcgaaatgggcaatttgggcgatttc
actggcgaggcgacatggatattggatgatcaggtcagccaatccattgctgaacgcatg
gtgcaagttgccgattattatgaagcccgccacgaagcactaagcgaaccgcaaaccggc
ggcgcgccgtacaagcctctgccaccggatttgttgtacgatttgcaaacggatacgacc
gaatggctggggaccaagctttatcaagtaacgccatttcaaacccttgaacgacccgac
gctgaaatcacctctcttgatggacagttggttgccaacttctcacaagagcgacaagcc
aaagacaccaatgtgtttgaggcggttttacatcgcatcaaggccaagcaggccgaaggc
aagcgtgccgttatcgcctgttggagcgaaggtacgcgcgatcgcatggcgcaagtgctc
aaagatcacgagcatgaaaacctaaaactgatccaattctggcagcaggctgaagattta
agcaaaaacgccattggcctcatcgtgctgggccttgaatcgggttttgaaaccaaaaac
cattatgtgctgtccgagcaggatattttgggcgaacgcattatccggtcccgcaagcgc
aaaaaaggggccgaagcaatcacagaggccagcggtttggccgctgacgatttggtggtg
catgtggaccatggcatcggtcgctttgtcgggttgaaagccattgaagtgacaggcgcg
ccgcacgattgcgtggaaatcgaatatgccaagggcgaccgcctatatctgccggtcgaa
aacatcgagttgctttcgcgctatggctctgaaggtggcgctggcgtgctcgacaaattg
ggcggcgtcgcgtggcaggccaagaaatcaaagctcaagcaacgcattcgcgaaatggcc
gagcaactcattaaagtcgccgccgcacgagaactcaccaaaggcgatgtcatcgagccc
acgacgggtctttatgaagagttttgcgcccgctttccgtttgaggaaaccgacgatcag
ctcaatgccatcgattctgtttttgaagatttgaccagtggtcgcgccatggaccggctg
gtttgcggcgatgtgggcttcggcaaaactgaagttgctctgcgcgcagcattcgccgtt
gccatgactggcaagcaagtcgcggtggttgtgccgacgacattgttggcgcggcagcac
tataagaccttcaaagaacggtttgccgatttgcccgtgcgcgtgcgtcaggcatcgcgc
ttggtttctgccaaagagctgaaagccaccaaagaggggatcgccagcggtgacgttgat
atcgtcatcggcacccacgcattgttgggcaaaagcatcaaattccacgaccttggcatg
ttggtgattgacgaagagcagcattttggtgtcgggcacaaagaacgcctgaaagagctg
aagtcgagcgtacacgtgctgaccctgtcggcaacgccgattccccgcaccctgcagatg
gcactcaccggcgtgcgcgatctttcaattttggcgacaccgccaattgatcgcttgtct
gttcggtcattcgtgatgccgttcgatagtttggtgatccgtgaagccttgttgcgcgag
aaataccgcggcggccagagcttttatgtggtgcctcgcattaaggaccaggcggacatt
gcccgtttcttggacgaacatgtgcctgaggtcagctacgtggtggcaaacggccaaatg
tctcccggcgaactcgatgacataatgaacgccttttacgatggcaagtttgacattctt
gtcgccaccaccatcgtcgaatcgggcttggacatccctaccgccaacacacttgtggtg
caccgggccgacaatttcggcttgtcgcaattgcaccaaattcgtgggcggatcgggcgg
tcgaaggtgcgcgcctacgccttgttcaccacgccagcgcatcaaaaactcacggatacg
gccacacggcgactgtcggtgctgcaatcgctcgatagtttgggcgcgggcttccaattg
gccagccacgacctcgatatccgcggtgcaggtaatattttgggtgaagagcaatcgggc
cacatcaaagaagttggctttgaactttatcaagccatgctggaagaggccgtcgcgcag
ctcaagacaggtgccgaagatgacgaggtggaagaccagtggtcgcctcaaatctcattg
ggcatgccagtgatgataccagaagcctatgtgccagacctgcaagtacgcatgcaactc
tatagacgcttgggcgatttgaccgaggcgcaggagatcgacgccttcggtgccgagctg
atcgatcgcttcggcccgttgccggaagaggtcaaacatctgctcaaaatcgtgctggtt
aagtccctttgtcgccgcgccaatgtcgaaaaagtggacgcgggaccgaaaggggctgtg
atcacgttgcgcaatggtgagtttccaaatccagctttacttgtgcaacttattgcaaat
ccagcagaaaaagctaaagtgcgcccggatcaaaagcttgtctttgcccgcaactggcct
gacaacaacaaaaagttgacaggtgcggcgcgaattttgtcgcaattggccaaactggct
gagcaaggatag
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