Methanococcus maripaludis C7: MmarC7_0384
Help
Entry
MmarC7_0384 CDS
T00553
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mmz
Methanococcus maripaludis C7
Brite
KEGG Orthology (KO) [BR:
mmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmz03016
]
MmarC7_0384
Enzymes [BR:
mmz01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MmarC7_0384
Transfer RNA biogenesis [BR:
mmz03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MmarC7_0384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
ABR65453
UniProt:
A6VG77
LinkDB
All DBs
Position
395329..395859
Genome browser
AA seq
176 aa
AA seq
DB search
MAKPKKTIPAKLSDERIVIYDKDGISRLNEKRYGELHENFLSLSFVEGLYLVSKNWISLR
DKTNKLLSFEELFDVAQNIDRKLCIRYLAYKDLRNRGYTVRTGLKYGSDFRLYERSNIDE
IHSRYLVKVFSEEIPCEISEITGFVRVAHSVRKELIIAIVDADGSVVYYNMGYLKL
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacctaagaaaacaatacctgcaaaactttcagacgaaaggattgtaatttac
gataaagacgggatatcccggttaaacgaaaaaagatacggtgaacttcacgaaaatttt
ttgtcgctttcttttgttgaaggactctaccttgtatcaaaaaactggatatcattgcga
gataaaactaataaacttctttcatttgaagaattgttcgatgttgcacagaatattgat
agaaaattgtgtatccgatatttggcatataaagacctcagaaataggggttatactgta
agaactggtttaaaatatggttctgattttaggctttacgaaagaagcaatattgacgaa
attcactctagataccttgtaaaagttttttcagaagaaataccttgcgaaatttcagaa
attacgggatttgttagagttgcacattcggttagaaaagaattgattattgcaatagtt
gatgctgatgggagcgtcgtatactacaacatgggatatttaaagctttaa
DBGET
integrated database retrieval system
