Methanococcus maripaludis C7: MmarC7_1176
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Entry
MmarC7_1176 CDS
T00553
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mmz
Methanococcus maripaludis C7
Pathway
mmz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MmarC7_1176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmz03019
]
MmarC7_1176
03009 Ribosome biogenesis [BR:
mmz03009
]
MmarC7_1176
04131 Membrane trafficking [BR:
mmz04131
]
MmarC7_1176
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmz04147
]
MmarC7_1176
Messenger RNA biogenesis [BR:
mmz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MmarC7_1176
Ribosome biogenesis [BR:
mmz03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MmarC7_1176
Membrane trafficking [BR:
mmz04131
]
SNARE
SNARE associated proteins
Others
MmarC7_1176
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MmarC7_1176
Exosome [BR:
mmz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MmarC7_1176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_2
AAA_14
AAA_22
AAA_5
AAA_33
nSTAND3
AAA_28
AAA_18
IstB_IS21
DUF815
Mg_chelatase
ABC_tran
AAA_7
ATPase
RNA_helicase
Sigma54_activat
Zeta_toxin
AAA_17
AAA_3
Vps4_C
NPHP3_N
TsaE
PhoH
AAA_24
Sigma54_activ_2
ATP-synt_ab
SLFN-g3_helicase
AAA_30
Parvo_NS1
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
ABR66242
UniProt:
A6VIG6
LinkDB
All DBs
Position
complement(1143090..1145492)
Genome browser
AA seq
800 aa
AA seq
DB search
MVDLVVAEAYQGDVGKGIVRIDPLTMEKLSIKAGDAIEIAGKEKTYATVWRGYLEDQGKG
IIRMDGLLRQNTKAGIGDKVKITVVEVKEAKKVTLAPMQAVRFSTGFESYVGSRLTDQVV
DKGSRVVIAVLGTAFPFIVTGTNPKGPVKINEYTQIELKTEPVTELKETKVPNVTYEDIG
GLKEEVKKIREMVELPMRHPELFEKLGIEPPKGVLLAGPPGTGKTLLAKAVANEAGANFY
TINGPELMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDEASGEVERRMVAQ
LLTLLDGLEGRGQVVILAATNRPDSIDMALRRPGRLDRELTIGIPDRHARNEILQIHTRN
MPLQPDYEKDEVIPLLNELIGEFDRSKIENIVKLVEKVPSDEEIKKLPENIEKIPSGEQI
EKILKDEDIEDKVKVRLNQMMVKELADKTHGFAGADLAALSKEAAMKTLRRLLPNLDLEK
EEIPREVLDNIKVTKSDFMGGLKEVEPSALREVLVEVPNIKWSDVGGLEDIKQDLKEAVE
WPIKNREMFERMGIRPPKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGE
SEKAIREIFRKARQAAPTVIFFDEIDSIAPKRGMSFGGSGVSEKVVNQLLTELDGLEEPK
DVVIIAATNRPNLLDPALLRPGRLDRIVLVSIPDENARFEIFKVHTKGMPTGKDVDLQKL
ARETNGYTGADIEALCREAAMIALREDINSKHVELRHFEAAFKRIAPSVKDEDMEEYRDL
AKEYGRTTGVSEIETSENTE
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggtagacttagtagttgcagaagcctatcagggagatgtaggtaaaggaattgtaaga
attgatccattaacaatggaaaaattgtcgataaaagccggagatgcaatagaaattgca
ggaaaggaaaaaacttacgcgactgtctggagaggttaccttgaagaccaaggtaaaggt
atcatacgaatggacggccttttgagacagaatactaaagcaggtattggggataaggta
aaaattactgtagtggaagtaaaagaagctaaaaaggtaactttagctccaatgcaagcg
gtaagattcagcacaggatttgaaagttatgttgggagcaggcttacagatcaggttgta
gataagggttcaagggtagtcattgcagtacttggaactgcatttccattcattgtaaca
ggtaccaatccaaaaggaccggtaaaaattaacgaatacactcaaattgagttaaaaact
gaacctgttacagaattaaaagaaaccaaagttccaaatgtcacatacgaagacattggt
ggtttaaaagaagaagtcaaaaaaatcagggaaatggtagaacttccaatgagacatcct
gaattatttgagaaactaggtattgaacctccaaaaggagttttacttgcaggacctcca
ggaacaggtaaaacattgcttgcaaaagctgttgcaaatgaagcaggtgctaatttctac
acgatcaatggtcctgaacttatgagtaaatacgtcggtgaaaccgaagaaaatttaaga
aaaatatttgaagaagcggaagaaaactcgccttcaattatattcattgacgaaattgat
gcagttgctccaaaaagggatgaagcaagcggtgaagttgaaagaagaatggttgctcag
ctcctgacattgcttgacggtctagaaggtagaggtcaggtcgtaattcttgcagctaca
aacagacctgattcaatcgatatggcgttaagaagacctggaaggcttgacagggaactc
acaattggaattcctgacagacatgcacgaaacgaaattttacagatacatacaagaaat
atgccacttcaaccagattatgagaaagatgaagtaattcccctattaaatgaacttatc
ggggaatttgacagaagtaaaattgaaaatatagttaaattggttgaaaaagtaccttca
gacgaagaaattaaaaaactccctgaaaatattgaaaaaataccttctggagaacagatc
gaaaaaatactcaaagatgaagatatagaagataaagtaaaagtaagattaaaccagatg
atggtaaaagaacttgcagacaagacccatggatttgcaggtgctgatctggctgctctt
tcaaaagaagctgctatgaaaactttgagaagattgcttcctaatctcgatctcgaaaaa
gaagaaattccgcgagaagtactcgataatattaaagtaactaaaagcgacttcatgggc
ggtttaaaagaagtagaaccttcagcattaagagaagtattggtagaagttccaaatatc
aaatggagtgatgttggtggacttgaagacattaaacaggacttaaaagaagctgttgaa
tggccaattaaaaacagggaaatgtttgaaagaatgggaataaggcctccaaaaggagta
ttactctttggtcccccaggaactggtaaaacactccttgcaaaagctgttgcaaacgaa
agtgaagcaaatttcatcagcgtaaaaggtcctgaaatattcagcaaatgggttggagaa
agcgagaaagcgatccgtgaaatctttagaaaagcacgacaggctgcaccaacagtcatt
ttctttgacgaaattgactccatagctccaaaaagaggaatgagctttggcggtagcgga
gttagcgaaaaagttgtaaaccagcttttaactgaactcgatggtcttgaagaaccaaaa
gacgttgtaattattgctgcaacaaaccgaccaaacctattagatcctgcacttttaagg
cctggaagactcgataggattgttttggtatccattcctgatgaaaatgcaagatttgaa
atatttaaagttcacacaaaaggaatgcctactggaaaagacgtggatctccaaaaactt
gcaagagaaactaatggatacacaggtgcagacatcgaagcattatgtagagaagctgca
atgattgcactaagagaagacatcaattcaaaacatgttgaattaaggcattttgaagca
gcgttcaaaagaattgctccttcggtaaaagatgaagacatggaagagtatagggacctt
gcaaaagagtatggaagaactacaggagtatctgaaattgaaacttctgaaaatactgaa
taa
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