Miniopterus natalensis (Natal long-fingered bat): 107524070
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Entry
107524070 CDS
T05883
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna05016
Huntington disease
mna05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
107524070 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
107524070 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107524070 (HTT)
04131 Membrane trafficking [BR:
mna04131
]
107524070 (HTT)
03029 Mitochondrial biogenesis [BR:
mna03029
]
107524070 (HTT)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107524070 (HTT)
Membrane trafficking [BR:
mna04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107524070 (HTT)
Mitochondrial biogenesis [BR:
mna03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
107524070 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
Motif
Other DBs
NCBI-GeneID:
107524070
NCBI-ProteinID:
XP_016051292
LinkDB
All DBs
Position
Unknown
AA seq
3018 aa
AA seq
DB search
MELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAARSLRAALW
RFAELAHLVRPQKCRPYLVNLLPCLTRTSRRPEESVQETLAAAIPKIMASFGNFANDNEI
KVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVEDEHPS
LLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSTEQLVQVYELTLHYAQHP
DHNVVTGALELLQQLLRTPPPELLRALTTPGGLVQLSNPSQEPGGRSRSGSIVELIAGGG
SSCSPVLSRKQKGKVLFGEAAALEDDSESRSEGSSPAFAASVKGEICGELAASSGVSTPG
SASSTADSTGHDIITEQPRSQHTLQPDPVDLTSCDLVSTATEGDEEDILSHSSSQISAVP
SDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGADGQYSGMQLGPPPDE
EEPVGLLPDEDADAFAAASVALQQAHLLKSMGHSRQPSDSSVDKFVSRDEAADPGEQEDK
PCRIKGDIGQSNDDDSAPLVHCVRLLSASFLLTGEKNALVPDRDVRVSVKALALSCVGAA
VALHPESFFSKLYKVPLDTAEYPEEQCVSDVLNYIHHGDPQVRGATAILCGTLVCSILGR
SRFQVGDWLGSVRTLTGNTFSLVDCVPLMQKTLKDESSVTCKLACTAVRHCVMSLCSSSY
SDLGLQLITDVLSLRSSSYWLVRTELLETLAEIDFRLVSFLEAKAEHLHRGAHHYTGLLK
LQERVLNNVVIHLLGDEDPRVRHVAASSLMRLVPKLFYKCDQGQADPVVAVARDQSSVYL
KLLMHETQPASHFSVSTITRIYRGYNLLPSIPDVTMENNLSRVIAAVSHQLITSTTRALT
FGCCEALCLLSTAFPVCTWSLGWHCGVPPLSTLDESRKSCTVGMATMILTLLSSAWFPLD
LSAHQDALILAGNLLAASAPRSLRSSFTADDEASPATAKQEEAWPALGDRTLVPMVEQLF
SHLLKVINVCAHVLDEVAPGPAVKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSPKK
GSDASPASRQSDASGPVTANKSSSMGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEK
FGGFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGT
NLASQFDGLSSNPSKSQGRAQRLGSSSMRPGLYHYCFMAPYTHFTQALADASLRNMVQAE
QDHDTSGWFDVLQKVSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSV
QLQKQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLV
LLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVAHAIPALQPIVHDLFVLRGTNKADAGK
ELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKESEDKWKRLSRQVADIILPMLAKQQ
MHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMASVSTVQLWISGILAILRV
LISQSTEDIVLSRIQELSFSPYLISCPMIHRLRDGDSDSVAEGHSEERQGKSLPEETFSR
FLLQLVGILLEDIVTKQLRVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRL
FTADSSDGSFYGLESLNARVRSMIPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPRRRS
LSSTKSLNPQMSGEEEDSDLASKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVN
HIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSAPTTLKKTLQCLEGIHL
SQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAANLQSSMAQLPVEELNRIQEH
LQSSGLAHRHQRLYSLLDRLRLSTAPGSRGPSPPVTSHPLDGDGPLALETVSPDKDWYVR
LVQSQCWTRSDSALLEGAELVNRIPPGDMTAFMMNPEFNVSLLAPCLGLGVREISGGLKS
PLFEAARVATLDRMTSVVQQLPAVHQVFQPSLPAEPTAYWSQLNDLFGDVVLYRSLTTLA
RALAQYLLVFPKLPDHLHLPPEKERDTVKFVVMTMEALSWHLIHEQVPLSLDLQAGLDCC
CLALQLPGLWSALASPEMVTHTCSLVHCVRFILEAIVVQPGDQLLGPERRTDTPKAARED
GGIDSHTQSPEYIAAACRMVAELVESLPTVLALGHKRNSGTPAFLTPVLRNIVVSLARLP
LVNSYTRVPPLVWKLGWSPTPGGDFGTSFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQ
FEETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPA
VSCLEQQPRNKPLKALDTRFGRKLSVIRGIVEQEIQAMVSKRENIATHHLYQAWDPVPSL
SPATTGALISHDKLLLQTNPERELGSMSYKLGQVSIHSVWLGNNITPLREEEWGEEEEEP
DVPAPSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPVILISEVVRSL
LVVSDLFTERNQFEMMYQTLTELRRVHPSEDEILLQYLVPATCKAAAVLGMDKAVAEPVS
RLLESTLRSSHLPSKIGALHGVLYVLECDLLDDTAKQLIPVVSDYLLSNLKGIAHCVNLH
SQQHVLVMCATAFYLIENYPLDVGPDFSASIIQMCGVMLSGSEESTPSTIYHCVLRGLER
LLLSEQLSRLDTESLVKLSVDRVNVHSPHRAVAALGLMLTCMYTGKEKISPGRTSDPSPA
TPDSESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSN
QQPYPQFMATVVYKVFQTLHSTGQAPMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFVSAS
TSPWVSAILPHVISRMGKLEHVDINLFCLVATDFYKHQIEEELDRRAFQSVFEVVAAPGN
PYQRLLACLRNIHKVATC
NT seq
9057 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtttctgctgtgcagtgacgatgcggagtcggatgtcaggatggtggctgac
gaatgcctcaacaaagtcataaaagctttgatggattctaaccttccgaggctgcagcta
gagctctataaggaaattaaaaagaatggtgctgcccggagcttgcgcgctgccctgtgg
aggtttgcagagctagctcacctggttcggcctcagaaatgcaggccttacctggtaaac
cttttgccttgcctgactcgaacaagcaggagacctgaggagtctgttcaggagaccttg
gctgcagccatacccaaaattatggcttcatttggcaattttgcaaatgacaatgaaatt
aaggttctgttaaaggccttcattgcgaacctgaagtcaagctccccaaccattcggcgg
acagcagctggctctgcggtgagcatctgccagcactccaggaggacgcagtacttttac
agctggctactaaacgtgctcttaggtttgctggttcctgttgaggacgaacacccctct
ctcctgattcttggagtgctgctcacactgaggtacttggtgcccttgctgcagcagcaa
gtcaaggacaccagcctgaaaggcagttttggggtgacacggaaagaaatggaagtctct
ccctcgacagagcagctggtgcaggtttacgagctaaccttgcattacgctcagcaccca
gaccacaatgtggtgactggggcgctggagctcctgcagcagctcctcaggaccccgccc
cctgagctcctgcgggccctgaccacacccggtggcctggtgcagctcagtaacccgagc
caggagcctggtggccgaagtcgcagcgggagtattgtggagctgatagctggagggggt
tcttcatgcagccctgtcctttcaagaaaacaaaaagggaaagtgctctttggagaagca
gcagccttggaggatgactctgagtcaaggtcggagggcagcagccccgccttcgcagcc
tcagttaagggtgagatctgtggggagctggctgcctcttctggggtctccactccgggc
tctgccagctccacggctgactccacgggccatgacatcatcaccgagcagccccggtct
cagcatactctgcagccggaccccgtggacctgactagctgtgacttggtgagcactgcc
actgagggggacgaggaggacatcttaagccacagctccagccagatcagtgctgtcccg
tccgacccagccatggacctgaacgacgggacccaggcctcctcacccatcagcgacagc
tctcagaccaccactgaggggcccgactcagccgtgactccttcagacagttctgaaatc
gtgttagatggtgccgacggccagtattcagggatgcagctcgggcccccaccggacgag
gaggagcccgtgggcctccttccagatgaggacgccgacgccttcgcagctgcctcggtc
gccctccagcaagcacatttgttgaaaagcatgggccacagcaggcagccctcggacagc
agtgtggacaagtttgtttcgagagatgaagctgctgacccaggagagcaggaagacaag
ccttgccggatcaaaggtgacatcggacagtccaatgatgacgactctgccccccttgtc
cattgtgttcgccttttatctgcctcatttttgctcactggcgagaaaaatgcgttggtt
ccggaccgggacgttcgtgtcagtgtgaaggcactagctctcagctgtgtcggggccgcc
gtggccctccaccctgagtctttcttcagcaagctttataaagtccctcttgacaccgcg
gaataccctgaggagcagtgtgtctcagacgtcttgaactacatccaccacggggacccg
caggtccgcggagccacggccattctctgcgggacactcgtctgctccatcctcggcagg
tctcgcttccaggtgggagactggctgggctccgttcgaactctcacaggaaacacgttt
tctctggtggactgtgttcctttgatgcagaaaacattgaaggatgaatcgtctgttact
tgcaagttggcgtgtactgctgtgcggcactgcgtcatgagcctctgcagcagtagctac
agtgacctggggctgcagctgatcaccgatgtgctgagcctgcggagcagctcctactgg
ctggtgaggacggagctgctggagacgctcgccgagattgacttcaggttggtgagcttt
ttggaagcaaaagcagaacacctgcaccgaggggctcaccattacacagggcttttgaaa
ctgcaagaacgggtgctcaataatgtggtcatccatttgcttggggatgaagaccccagg
gtgcgacacgttgctgcctcttcattgatgaggcttgtcccaaagctgttttataaatgt
gaccaaggacaggctgatccagtggtggcagtggcaagggaccagagcagtgtttacctg
aaacttcttatgcacgagacgcagcctgcatctcacttctctgtcagcaccataaccaga
atatatagaggctataacttactgcccagcatccccgatgtcaccatggagaataacctc
tccagagtcatcgcagccgtgtctcaccagctaatcacgtccaccactcgggcgctcacg
ttcggatgctgcgaagctttgtgtcttctctcaactgcctttcctgtctgcacttggagt
ctgggctggcattgtggggtgcccccactgagcaccctggacgagtctaggaagagctgt
actgtcggcatggccacgatgatccttaccctgctctcgtcagcttggttcccgttggat
ctctcagcccatcaggatgctttgatcttagccggaaatttgcttgcagccagtgccccc
aggtctctgaggagttcgttcaccgctgacgacgaggccagcccggccaccgccaagcag
gaagaggcatggccagctctgggggaccggaccctggtgcccatggtggagcagctcttc
tcccacctgctgaaggtgatcaatgtctgtgcccacgtattggacgaggtggctcctggg
cccgcagtgaaggcagccctgccgtccctgacgaaccccccttctctaagtcccatccga
cggaaagggaaggagaaagaaccaggtgaacaggcatctgtgccactgagccccaagaag
ggaagtgacgccagtccagcctcccgacaatcagatgcctcagggcctgttacagcaaat
aaatcctcatcaatggggagtttctaccaccttccttcgtacctcaagttgcacgacgtc
ctgaaagctacgcacgccaactacaaggtcaccttggaccttcagaacagcacagagaag
tttggggggttcctgcgctcagccttggacgttctctctcagattctggagttggcaacg
ctgcaggacatcgggaagtgcgtggaggagatcctagggtacctgaagtcctgcttcagc
cgggaaccaatgatggcaactgtgtgcgtccagcagctgttgaagactctctttgggaca
aacttggcctcccagtttgatggcttgtcgtccaaccccagcaagtctcaaggccgagcc
cagcgcctcggctcgtccagcatgagaccaggcctgtaccactactgcttcatggctccg
tacacccacttcacccaggccctggccgacgccagcctgcggaacatggtgcaggcagag
caggaccacgacacctcggggtggttcgatgtactccagaaagtgtccacccagttgaag
acaaacctcacaagtgtcacaaagaaccgtgcagacaagaatgctattcacaatcacatc
cgcctgttcgagcctctggtcataaaggcactgaagcagtacacgaccaccacgtctgtg
cagctgcagaagcaggtcttggatttgttggctcagttggttcagctgcgggtcaactac
tgtctcctggattcagatcaggtgtttattgggttcgtgctgaaacagtttgaatatatt
gaagtgggccagttcagggaatcagaggcaattattccaaacatctttttcttcctggtg
ctgctgtcttacgagcgctatcattcaaaacagatcattggaattcctaagatcattcag
ctctgcgacggcatcatggctagtgggaggaaggctgtggcacacgccataccggctctg
cagcccatagtccacgacctcttcgtattaagaggaaccaacaaagctgacgcaggaaag
gagctggaaacccagaaggaggtagtggtgtcgatgctcctgagactcatccagtaccac
caggtgctggagatgttcatcctggtcctgcagcagtgccacaaggagagcgaggacaag
tggaagcggctgtcccggcaggtcgccgacatcatcctcccgatgctggccaaacagcag
atgcatattgattcccatgaagcccttggtgtgttaaacactttgtttgagattttggcc
ccttcctccctgcggcccgtggacatgcttttacggagcatgttcgtcacgccagacacc
atggcatccgtgagcactgtccagctctggatctcgggaatcctggccattttgagggtg
ctcatctcccagtcgactgaagacattgtcctttcccgcatccaggagctgtccttctct
ccatacctaatctcgtgtccgatgattcataggctaagagatggggacagtgattcagtg
gcagaaggacacagtgaagagagacaggggaagagtttgccagaagaaacattctcaagg
tttctcctacagctggttggcattctcttagaggacattgtcacgaaacagctgagagtg
gagatgagtgagcagcagcatactttctattgccaggaactgggcacgttgctcatgtgt
ctgatccacatcttcaagtctggaatgttccggagaatcacagcagctgcgtctagactc
ttcacagcagacagctccgatggcagtttctatggcctggagagcttgaatgcgcgggtg
cgctccatgatccccacacatccggccctcgtgctgctctggtgccagatcctgctgctt
gtcagccacactgactaccgctggtgggccgaggtgcagcagacccccagaagacgcagt
ctgtccagcacaaagtcgctgaatccccagatgtctggagaggaggaggactccgacttg
gcgtccaaactcgggatgtgcaacagagaaatcgtccggcgaggcgccctcatcctcttc
tgcgattacgtctgtcagaacctacacgattctgagcacttgacgtggctgattgtcaac
cacatccaagacctaatcagtctgtcccacgagcctcccgtgcaggacttcattagtgct
gttcaccggaattccgccgccagtggccttttcatccaagccattcagtctcgctgtgaa
aacctctcggctcccaccaccctgaagaaaacgcttcagtgcttggaagggatccacctc
agccagtcgggcgccgtgttgacgctgtatgtggacaagctcttgtgcactccgttccgc
gtgctggctcgcatggttgacacacttgcttgtcgccgggtagaaatgcttttggctgca
aatttacagagcagcatggcccagctgccagtggaagaactgaacagaatccaggagcac
ctgcagagcagcgggcttgctcacagacaccagaggctctactccctgctggacaggctt
cgtctctccaccgcaccagggtcgcgtggcccctctcctcctgtcacatcccacccgctg
gatggggatgggcccctggcgcttgagacagtgagtccagacaaggactggtacgtgcgc
ctggtccagtctcagtgctggacgaggtccgactctgcgctgctggagggggcggagctg
gtgaatcggatccctcctggtgacatgactgctttcatgatgaacccggagttcaacgtc
agcctgttagccccatgcttgggcttgggcgtgcgggaaatttctggaggcctgaagagt
cccctctttgaagcagctcgagtggcgactctggaccggatgaccagtgtggttcagcag
ctccctgccgtccatcaggttttccagccctccctgcctgcggagcccaccgcctactgg
agccaattgaatgatctgtttggggatgtcgtattgtatcgctccctgaccacgctggcc
cgcgccctggcccagtacctgctggtgttccccaaactgcccgaccacctgcaccttcct
ccagagaaggagagggacactgtgaagtttgtggtcatgaccatggaggcgctgtcgtgg
catctgatccatgagcaggtcccactgagtctggacctgcaggcaggcctggactgctgc
tgcctggccctgcagctacccggcctctggagtgcactggcctccccggagatggtgacc
cacacctgctccctcgtccactgcgtccgcttcatcctggaagccattgtggtgcagccc
ggggaccagcttctcggtccagaaagaaggacagacaccccgaaggctgccagagaggac
ggcggaatcgattcacacacgcagagtcccgaatacatcgccgcagcctgcaggatggta
gcagagttggtggagtctttgccaaccgtgctggccttgggtcataaaagaaacagtggc
acccccgccttcctcacgccagtgctcaggaacatcgtggtcagcttggcccgcctgccc
ctcgtcaacagctacacgcgcgtcccccccctggtctggaaactcgggtggtcacccacg
ccgggaggggatttcggcacgtccttccccgagatccctgtggagtttcttcaggagaag
gaggtcttcaaggagttcatctaccgcatcaacacgctagggtggaccagccgcacccag
tttgaggaaacatgggccaccctccttggtgtcctggtgactcagccccttgtgatggag
caggaggagagcccaccggaggaagacacggagaggacccagatcaatgtcctggccgtg
caggccatcacctctctggtgctgagcgcgatgactgtgcccgtggctggcaacccagct
gtgagctgcttagagcagcagcctcggaacaaacccctgaaagctctcgacaccaggttt
gggaggaagctgagtgtgatcagaggaattgtggagcaggagattcaagcaatggtgtcg
aagagggagaacatcgctacccaccatctctaccaagcctgggatcccgttccctctctg
tctccagccactacaggtgccctcatcagccacgacaagcttctgctgcagaccaatccc
gagcgggagctgggcagcatgagctacaagctcggccaggtgtccatccactcggtgtgg
ctggggaacaacatcacgcccctgagagaggaggaatggggcgaggaggaggaggagccc
gatgtccctgcaccctcatcaccacccacgtctccggtcaactccaggaaacaccgggcc
ggggttgacatccactcctgttcgcagttcttacttgaattgtacagtcgctggatcctg
ccgtcaagctctgcccgaaggacacctgtcatcctcatcagtgaagtggttcgatctctc
ctcgtggtctcggacttgttcactgagcgcaaccagtttgagatgatgtatcagacgctg
actgagctgcgtagggtgcacccctcagaagatgagattctcttgcagtacctggtgcct
gccacctgcaaggcggctgctgtcctcggcatggacaaggctgtggccgagccggtcagc
cggttgctggagagcacgctcaggagcagccacctgcccagcaagattggggctctgcac
ggcgtcctctacgtgctggagtgcgacctcctggacgacaccgcgaagcagctcatccca
gttgtcagtgactatctcctctccaacctcaaaggcatagcccactgcgtgaaccttcat
agccaacagcacgtgctggtgatgtgcgccactgccttctacctgatcgagaactacccc
ctggacgtagggccggacttctccgcctccatcatccagatgtgtggggtgatgctgtcc
ggaagtgaggagtccacaccgtccaccatctaccactgtgtcctgaggggcctagagcgc
ctcctgctgtccgagcagctctcccgtctggacacagagtccctggtcaagctcagtgtg
gacagagtgaatgtgcacagcccgcaccgggccgtggcggccctgggcctgatgctcacc
tgcatgtacacaggaaaggagaaaatcagtccgggcaggacctcagaccccagccctgcc
acccctgacagcgagtctgtgatcgtggccatggaacgtgtgtctgtcctttttgacagg
atcaggaaggggtttccctgtgaggcccgagttgtggcgcggatcctccctcagttttta
gatgatttcttcccgccccaagacgtcatgaacaaagtcatcggagagtttctgtccaac
cagcagccctacccgcagttcatggccaccgtggtgtacaaggtgttccagaccttgcac
agcacgggacaggcgcccatggtccgggactgggtcatgctgtcgctctccaacttcacg
cagaggacacccgtggccatggccgtgtggagcctctcctgcttctttgtcagcgcgtcc
accagcccttgggtctccgccatccttccccacgttatcagcaggatgggcaagctggaa
cacgtggacattaaccttttctgcctggtggccacggacttttacaaacaccagatagag
gaggagctggaccgccgggcctttcagtcagtgttcgaggtggttgcggccccaggaaac
ccgtatcagcgactgctggcctgtttgcggaacatccacaaggtcgccacgtgctga
DBGET
integrated database retrieval system
