Miniopterus natalensis (Natal long-fingered bat): 107524152
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Entry
107524152 CDS
T05883
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107524152 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mna03041
]
107524152 (DHX38)
Enzymes [BR:
mna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107524152 (DHX38)
Spliceosome [BR:
mna03041
]
Complex C
Other components
Step II factors
107524152 (DHX38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
T2SSE
nSTAND_NTPase5
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Sigma54_activ_2
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
107524152
NCBI-ProteinID:
XP_016051415
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MEDPSEDTSIHRLEGTDGDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSRISSYKDWEESKDDQRDAEEDGSDQSGRGSRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDRKERSRDRDCDRKRDRDERDRSRHSSR
SERDGGSERSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSKRSQWESPSPSPSYRDS
DRSHRPSSRDRDRSVRSRYSDDTPLPTPSYKYNEWADDRKHLGSTPRLSRGRARREDGEE
GISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQKR
ISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIV
FTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGVK
KEEEPDKALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELL
TIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMG
GNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTD
VLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQED
YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL
PSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQI
YPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLG
VQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS
CDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNN
YSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAA
KLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLA
ELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRAT
KIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccccagtgaggatacctcgatccatagattggaaggcactgatggggactct
caggttggtggtcttatttgcaagaccaaaagtgcagccagtgagcagcatgtgttcaag
gcccctgctccccgtccttcattgctgggactggacttgttggcttccctgaaacggagg
gagcgagaggagaaagacgatggggaggacaagaagaagtccaggatctcttcctacaag
gactgggaagagagcaaggatgaccagagggatgctgaggaggatggcagtgaccagtcc
ggtcgaggtagccgaaaagacagacattatcgatctgctcgagtagagactccatcccat
cctggtggtgtgagcgaagagttttgggaacgtagtcggcagagagagcgggagcgccgg
gaacatggtgtctatgcctcatccaaagaagaaaaggatcggaaggaaagatcgcgggat
cgagactgtgaccgcaagagagacagagatgagcgggatagaagcaggcacagcagcaga
tcagagcgggatggagggtcagagcgcagcaggagaaatgaaccagagagcccacgacac
cgacctaaagatgcagccaccccatcaaggtctacctgggaggaagaggacagtggctat
ggctcttcaaagcgctcgcagtgggaatcgccctccccttcaccttcctatcgggattct
gatcggagccatcgaccgtccagcagagatcgggataggtctgtaaggagcaggtactca
gacgacacacctttgccaaccccatcctacaaatacaacgagtgggccgatgacagaaag
cacctagggtccaccccgcgtctctccaggggccgagcaagacgtgaggatggtgaagaa
gggatttcgtttgacacagaagaggagcggcagcaatgggaggatgaccagaggcaagct
gaccgggattggtacatgatggatgaggggtatgacgagttccacaatcccttggcctac
tcttccgaggactatgtgaggaggcgggagcagcacctgcataaacagaagcagaagcgc
atttcggctcagcggagacagatcaatgaggataacgagcgctgggagaccaaccgcatg
ctcaccagtggggtggtccatcggctggaggtagacgaggactttgaagaggacagcgcg
gccaaggtgcatctgatggtgcacaacctggtgcctccctttctggatgggcgcatcgtc
ttcaccaagcagccagagcctgtgattccagtcaaggatgccacttctgacctggccatc
attgctcgaaaaggcagtcagacagtgcggaagcacagggagcaaaaggaacgcaagaag
gctcaacacaaacactgggaactggctggaaccaaactgggagatataatgggtgtcaaa
aaagaggaagagccggataaagcgctaacagaagatggtaaagtggactacaggacagag
cagaagtttgcagatcacatgaagaaaaagagtgaggccagcagtgaatttgcaaaaaag
aagtcaattctggagcagaggcagtatctgcccatctttgcagtgcagcaggagctactc
actattatcagagataacagcatcgtgattgtggttggggagacggggagtggtaagacc
actcagctgacccagtacttgcatgaagatggttacacggactatgggatgattgggtgc
acccagccccggcgtgtggcggccatgtcggtggccaagagagtcagtgaagagatgggg
ggaaaccttggcgaggaggtgggttatgccatccgcttcgaagactgcacttcagaaaac
accttgatcaaatacatgactgacgggatcctgctccgagagtccctccgggaagcagac
ctggatcactacagtgccatcatcatggacgaggcgcacgagcgctccctcaacaccgac
gtgctcttcgggctgctccgggaggtggtggctcggcgctcagacctgaagctcattgtc
acatctgccactatggatgccgagaaatttgctgccttctttgggaatgttcccatcttc
cacatccccggccgtaccttccctgttgacatccttttcagcaagaccccgcaggaggat
tacgtggaggctgcagtgaagcagtccttgcaggtgcacctgtcaggggctcctggggac
atcctcatcttcatgcctggccaggaggacatagaggtgacctcagaccagattgtggag
catctggaagaactggagaatgcgcccgccttggccgtgctgcccatctactcccagctg
ccttctgatcttcaggccaaaatcttccagaaggctccggatggtgttcggaagtgtatt
gttgccaccaacattgctgagacatctctgactgtcgacggcatcatgtttgttatcgat
tctggttattgcaaattaaaggtcttcaaccccaggattggcatggatgctctgcagatc
taccccatcagccaggccaatgccaaccagaggtcggggcgagctggcaggacgggccca
ggtcagtgcttcaggctttatacccagagcgcctacaagaatgagctcctgaccaccacg
gtacctgagatccagaggaccaacctggccaatgtggtgttgctgctgaaatctctaggg
gtgcaggacctgctgcagttccacttcatggacccgcccccagaggacaacatgctcaac
tccatgtatcagctctggatccttggagctctggacaacacaggtggtctgacctcaact
ggacggctgatggtggagttcccgctggacccagccctgtccaagatgctcattgtgtcc
tgcgacatgggctgcagctccgagattctgctcattgtgtccatgctctcggtccccgcc
atcttctacaggcccaagggccgagaggaggagagtgatcagatccgggagaagtttgct
gtccctgagagtgatcatctgacctacctgaatgtttacctgcagtggaagaataataat
tactctaccatctggtgtaatgatcattttatccatgccaaggccatgcggaaggtccgg
gaggtgcgggctcagctcaaggacatcatggtgcagcagaggatgagtctggcctcctgt
ggcactgactgggacattgtcaggaagtgtatatgtgctgcctatttccaccaggcagcc
aagctcaagggaattggggagtacgtgaatatccggacagggatgccctgccacttgcac
cctaccagctccctctttggaatgggctacaccccagactacatagtatatcatgagttg
gtcatgaccaccaaggagtacatgcagtgtgtgactgctgtggatggagagtggctggcg
gagctgggccccatgttctacagtgtgaaacaggcaggaaagtctcggcaggagaaccgc
cgacgggccaaagaggaggcctctgccatggaggaggagatggcgctggctgaggagcag
ctgcgagcccggcggcaggagcaggaaaagcgcagccccctgggcagtgtcagggctaca
aagatctatactccaggtcggaaagagcaaggggaacccatgactcctcgccgcacgcca
gcccgctttggtctatga
DBGET
integrated database retrieval system
