Miniopterus natalensis (Natal long-fingered bat): 107524349
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Entry
107524349 CDS
T05883
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107524349 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107524349 (PARN)
Enzymes [BR:
mna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107524349 (PARN)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107524349 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
RRM_1
T6PP_C
Motif
Other DBs
NCBI-GeneID:
107524349
NCBI-ProteinID:
XP_016051709
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYVNSKYIIKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEDNKNLDLDPCTGFQRKLIYQTLNWKYPKGIHVETLETEKKERYIV
VSKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
CCPLPEDLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKDTPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMTNYLGSFLSPPKIHVSARSKLIEPFIN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVGKKHEEKQIKRKWPEDSWKEVERKRLN
NQCISCALQNHYYRANSPTAASTGGKRKRSLSQAEAGLEASMSGEISDLELEQTDSCVEP
PSEGRKKTKKFKRMKKDLSPAGGVSDSSATLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcacaaagtgtaccaggccatagag
gaggcggacttctttgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
accgcattaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgactacgtaaat
tcaaagtatataataaagtcatttaacttctatgttttcccgaaacccttcaatagatcc
tcaccagatgtcaaatttgtttgtcagagctcaagcattgactttctagcaagccaagga
tttgatttcaataaagtttttcgcaatggaattccatatttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgtttacagtccaacggtgcaggagctctatca
tatgtgtctcctaacacatcaaaatgtcctgtgacgattcctgaggatcagaagaagttt
attgaccaagtggtagagaaaatagaagatttgttacaaagtgaagacaataagaacttg
gatttagacccatgcacggggttccaaagaaaactaatttatcagactttgaactggaag
tatcccaaaggcattcacgttgagactttagaaactgaaaagaaagagcgatacatagtt
gtcagcaaagtggatgaagaagaacgcaaaagaagagagcagcagaaacatgctaaagag
caggaagaactgaatgatgctgtgggattttccagagtcattcatgccattgctaattcg
ggaaaacttgttattggacacaatatgctcttggatgttatgcacacagttcatcagttc
tgctgccctctgcccgaggacttaaatgaatttaaggagatgacaacatgtgttttcccc
agactcttggatactaaattgatggccagcacacaaccttttaaggatattattaacaac
acatcccttgcagaattggaaaagcggttaaaagatacacctttcaaccctcctaaagtt
gaaagtgcagaaggttttccaagttatgacacggcttctgaacagctccatgaggcaggc
tatgatgcttatatcacaggactgtgtttcatctccatgacaaactacctaggttctttt
cttagtcctccaaaaattcatgtgtctgccagatcaaaactcattgaaccttttattaac
aagttatttcttatgagagtcatggatattccctatctaaatttggaaggaccagacttg
caacctaaacgcgatcatgttctccatgtgacattccccaaagaatggaaaaccagtgac
ctttaccagcttttcagtgcctttggtaacattcagatatcttggattgatgacacatca
gcatttgtttctctcagccagcctgagcaagtacaaattgctgtcaataccagcaaatat
gcagaaagctatcggattcagacctatgctgaatatgtggggaaaaaacatgaggagaag
cagatcaagagaaagtggccagaagatagttggaaggaggttgagagaaagcggttaaac
aatcagtgcatatcctgtgctctgcagaatcactactaccgtgccaatagtcccacagcc
gccagcacaggaggaaagagaaagcggagtctcagtcaagcagaggctggcttggaggcc
agcatgtcgggagagatttctgaccttgagcttgagcagacagattcctgtgtagaaccc
ccctccgagggaaggaaaaagaccaagaaatttaaaagaatgaagaaggatctttcacca
gcaggaggcgtctcggacagctctgccacgctctttgaagttcctgacacgtggtag
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