Miniopterus natalensis (Natal long-fingered bat): 107526138
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Entry
107526138 CDS
T05883
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03015
mRNA surveillance pathway
mna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107526138 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
107526138 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107526138 (PABPC1)
03041 Spliceosome [BR:
mna03041
]
107526138 (PABPC1)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107526138 (PABPC1)
mRNA cycle factors
Stress granule specific factors
107526138 (PABPC1)
Spliceosome [BR:
mna03041
]
Complex C
Other components
Complex C specific factors
107526138 (PABPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_occluded
RRM_7
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
107526138
NCBI-ProteinID:
XP_016053983
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV
CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT
NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM
NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR
KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK
EERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQL
RPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQRVANTSTQTMG
PRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLA
SAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAV
AVLQAHQAKEAAQKAVNSATGVPTV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgatgttataaagggcaagccagttcgcatcatgtggtctcagcgtgatcca
tcactgcgcaaaagtggagtcggcaacatattcattaaaaatttggacaaatccattgat
aataaagcactgtatgatacattttctgcttttggtaacatcctttcatgtaaggtggtt
tgtgatgaaaatggttccaagggttatggatttgtacattttgagacacaggaagcagct
gaaagagctattgaaaaaatgaatgggatgcttctaaatgatcgcaaagtatttgttggg
cgatttaagtctcgtaaagaacgagaagcagaacttggagctagagcaaaagagttcacc
aatgtttacatcaagaattttggagaagacatggatgatgagcgccttaaggatctcttt
ggcaagtttggacctgccttaagtgtgaaagtaatgaccgatgaaagtggaaaatccaaa
ggttttggattcgtaagcttcgaaaggcatgaagatgcacagaaagctgtggatgagatg
aatggaaaggagctcaatggaaaacaaatttacgttggccgagctcagaaaaaagtggaa
cggcagacggaacttaagcgcaaatttgaacagatgaagcaggacaggatcaccagatac
cagggtgttaacctttatgtgaaaaatcttgatgatggtattgatgatgaacgtctccgg
aaagagttttctccatttggtacaatcactagtgcaaaggttatgatggagggtggtcgc
agcaaagggtttggttttgtatgtttctcctccccagaagaagccactaaagcagttaca
gaaatgaatggtagaattgtggctaccaagccattgtatgtagctttagctcagcgcaaa
gaagagcgccaggctcacctcactaaccagtatatgcagagaatggcaagtgtgagagct
gtgcccaaccccgtaatcaacccctaccagccagcacctccttcaggttacttcatggca
gctatcccacagactcagaaccgtgctgcatactatcctcctagccaaattgctcaacta
agaccaagtcctcgctggactgctcagggtgccagacctcatccattccaaaatatgccc
ggtgctatccgcccagccgctcctagaccaccatttagtactatgagaccagcttcttca
caggttccacgagtcatgtcgacacagcgtgttgctaacacatcaacacagacaatgggt
ccacgtcctgcagcggctgctgctgcagctactcctgctgtccgcactgttccacagtat
aaatatgctgcaggagttcgcaatcctcaacaacatcttaatgcacagccacaagttacc
atgcagcagcctgctgttcatgtacaaggtcaggagcctttgactgcttccatgttggca
tctgcccctcctcaagagcaaaagcaaatgttgggtgaacggctgtttcctctcattcaa
gccatgcaccctactcttgctggtaaaatcactggcatgctgttggagatcgataattca
gaactacttcatatgcttgagtctccagagtctctccgctctaaagttgatgaagctgta
gctgtactacaagcccaccaagctaaagaggctgcccagaaagcagttaacagtgccact
ggtgttccaactgtttaa
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