Miniopterus natalensis (Natal long-fingered bat): 107527148
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Entry
107527148 CDS
T05883
Symbol
SKIV2L2
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107527148 (SKIV2L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107527148 (SKIV2L2)
03041 Spliceosome [BR:
mna03041
]
107527148 (SKIV2L2)
03009 Ribosome biogenesis [BR:
mna03009
]
107527148 (SKIV2L2)
03016 Transfer RNA biogenesis [BR:
mna03016
]
107527148 (SKIV2L2)
Enzymes [BR:
mna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107527148 (SKIV2L2)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
107527148 (SKIV2L2)
Spliceosome [BR:
mna03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107527148 (SKIV2L2)
Complex C
U4/U6.U5 tri-SnRNP related factors
107527148 (SKIV2L2)
Ribosome biogenesis [BR:
mna03009
]
Eukaryotic type
Pre-60S particles
Helicases
107527148 (SKIV2L2)
Transfer RNA biogenesis [BR:
mna03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
107527148 (SKIV2L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
107527148
NCBI-ProteinID:
XP_016055290
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
YFTVTLNRTNTAEFILNCVLLRKRSDGNLQSESTSAGNNKRDADFEGTDEPIFGKKPRVE
ESITEDLSLADLMPRVKVQSVETVEGCTHEVALPADEDYLPLKPRVGKAAKEYPFILDAF
QREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMY
EEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERG
VVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPA
GGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQKGRKGGTKGPSNVFKIVKMIME
RNFQPVIIFSFSKKDCEAYALQMTKLDFNTGEEKKMVEEVFSNAIDCLSDDDKKLPQVEH
VLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARK
FDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPAVGKQLLKGSADPLNSAF
HLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPAVVEKVKNSEEQYNKIVIPNEESV
FIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNV
KPNSGELDPLYVVEVLLRCSRESLKNSATEAAKPARADEKGEMQVVPVLVHLLSAISSVR
LYIPKDLRPLDNRQSVLKSIQEVQKRFPDGVPLLDPVDDMGIQDQGLKKVIQKVEAFEHR
MYSHPLHNDPNLETVYTLCEKKAQIAVDIKSAKRELKKARTVLQMDELKCRKRVLRRLGF
ATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPK
LTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVHTWATGATFAHIC
KMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
tattttacagtcactcttaacagaactaatactgcagaattcattttaaactgtgtactt
ctcaggaaacgttctgatggcaacttacaatccgagtccactagtgctggaaacaacaag
agagatgcagatttcgagggcacagatgaacccatttttggaaagaagcccagggtagaa
gagtcaataactgaagacttaagtttggcagacttgatgcccagagtgaaggtgcagtcc
gtggaaactgttgaagggtgtacgcatgaggttgcacttcctgcagatgaagattattta
ccacttaaacctcgagttggaaaagctgcaaaggaatacccgttcatccttgatgctttt
caaagagaagctatccagtgtgttgataataatcagtctgtgttggtgtctgcacataca
tcagcggggaaaactgtatgtgccgagtatgccattgcgctggccttaagggagaagcag
cgtgtaatatttaccagcccaattaaggctctgagcaaccagaagtaccgtgaaatgtat
gaggaatttcaagatgttggtctgatgacgggagatgttactattaaccctacggcatcc
tgtcttgttatgaccacagagattttgagaagtatgctgtacagaggttctgaagtgatg
cgagaggttgcttgggtcatatttgatgaaattcattacatgagagattcagagcgtggt
gtggtatgggaagaaactattattttgcttccagataatgtccactatgtctttctttcg
gctactattccaaatgcccgacagtttgctgaatggatttgccatttgcataagcagcct
tgccacgtaatttacacagattaccggcctactccattgcagcactacattttccctgcg
ggcggagacggcctgcacctcgtggtggatgaaaatggtgacttcagagaagataacttt
aacacggcaatgcaagtccttcgagatgcgggcgacttggcaaaaggagatcagaagggt
cggaaaggaggaacaaaaggaccatcaaatgtgttcaagattgtgaagatgattatggaa
agaaatttccaacctgtaattattttcagtttcagtaagaaagattgcgaggcctatgca
cttcaaatgaccaaattggatttcaacacaggtgaggagaagaagatggtagaagaagta
ttcagtaacgccattgactgcctgtcggatgacgacaagaagctccctcaggttgaacac
gtacttcctcttctgaagcgtgggattgggatccaccatggtggtttacttcctattttg
aaggaaactatagaaattctcttttctgaaggattgataaaggcgttgtttgcgacggag
acttttgctatgggaattaacatgccagctagaacagttttatttacaaatgcccgaaaa
tttgatgggaaagattttcgatggatttcctccggtgaatacattcagatgtctggtcgt
gctggaaggaggggaatggatgacagaggcattgtgattcttatggtggatgagaagatg
agcccagcagtcggaaagcagctgcttaagggctcagctgaccccctgaacagtgcgttc
catttaacctacaacatggttttgaacttgctgcgtgtggaggaaatcaatcctgagtac
atgctggagaagtccttctaccagttccagcattacagagccattccagcagtggtggaa
aaggtaaagaactcagaagagcaatataataaaatagtaatacctaatgaggaaagtgtg
ttcatctattataagattagacagcagcttgcaaagctgggaaaagaaattgaggagtat
atccacaagccaaagtactgcttaccattcctgcagccaggccgcttggtcaaggtaaag
aacgaaggagatgattttggctggggagtcgtcgtgaatttctcaaaaaagtcgaatgtt
aagcccaattcgggggaactggaccctttgtatgtggtggaagtgcttctacgctgcagc
agagagagcctgaaaaactcggccacggaggctgcaaagccagccagagctgatgagaag
ggggagatgcaggttgttccagttctggtgcatctcctgtcggctatcagcagtgtcagg
ctctacatccccaaggaccttcgacccctggacaacagacagagcgttctcaagtcaata
caggaagttcagaagcgttttcctgatggtgtccccctgttagacccagtcgatgacatg
ggcattcaagaccagggcctgaaaaaggtcatccagaaagtggaggcttttgagcatcgg
atgtactcccatccccttcacaacgacccaaacctggaaacggtgtacacgctgtgtgaa
aagaaagcacagattgcagtagatattaagtctgcaaagcgggaactgaagaaagcaaga
actgtcctgcagatggatgagctcaagtgtcgcaagcgtgttttacggcgactgggcttt
gccacctcttctgatgtcatagagatgaagggacgcgtggcatgtgagataagcagtgcc
gacgagctcctgctcaccgaaatgatgttcaacggcctgttcaacgacctgtctgcggag
caggccacggcgctgctgagctgctttgtgttccaggagaactctagtgagatgcccaag
ttaacagagcagttagcaggaccacttcgtcagatgcaggaatgtgctaaacgaattgca
aaagtttcagctgaagccaagttggaaatcgatgaggaaacttacctcagctcgttcaag
ccccacctcatggacgtcgtgcacacctgggcaactggggcaacctttgcccacatctgc
aaaatgacagatgtcttcgaaggcagcatcattcgctgcatgaggcgcctggaagagctg
ctccgacagatgtgccaggcggcgaaggccattgggaacacggagctagagaacaagttt
gcggaaggaatcaccaaaatcaagagagacattgtgtttgctgccagcctgtacctgtag
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integrated database retrieval system
