Miniopterus natalensis (Natal long-fingered bat): 107527502
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Entry
107527502 CDS
T05883
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna00100
Steroid biosynthesis
mna01100
Metabolic pathways
Module
mna_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107527502 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mna01006
]
107527502 (FDFT1)
Enzymes [BR:
mna01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107527502 (FDFT1)
Prenyltransferases [BR:
mna01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107527502 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF1539
Motif
Other DBs
NCBI-GeneID:
107527502
NCBI-ProteinID:
XP_016055764
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MAAAACGTKAMCLFKRTLVLSPAAAPKGTRTPSRCCPLPPKDWPRGEGVCFRLRRPAAAG
RGPPSHSCSSAAATSLCALCPQDSLSSSLRTCYKHLHQTSRSFAAVIQALDEEMRHAVCI
FYLVLRALDTLEDDMTISIEKKLPLLHNFHSYLYEPDWRYMESKEKDRQVLEDFPTISLE
FRNLAVKYQTVIVDICRKMGFGMAEFLDKHVTSEEEWDKYCHYVAGLVGIGLSRLFSASE
LEDPVVGEDIECANSMGLFLQKTNIIRDYLEDQQDGREFWPQEVWSKYVKKLGDFAKPEN
VDLAVQCLNELITNALRHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFK
GVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPNSDSSSSKTRQIISTIRTQNL
PSCQLVSRSHYSPIYLSFLMLLAALSWQYVSTLSQVTEDYVQTGEH
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgcctgcggcaccaaggctatgtgcctcttcaagcggaccttggtgctg
agccccgccgcggcgcccaagggcacccgcaccccctcgcgctgctgtcccttgcctccc
aaggactggccacggggagagggcgtgtgctttcggctacggcgccccgcagctgcgggc
cgcgggcccccgtctcactcgtgctcctccgccgctgctacctccctgtgtgctctctgc
ccgcaggactcgctcagcagcagcttgagaacttgctacaagcatctgcaccagaccagt
cgcagtttcgcagctgttatccaggcgctggatgaagaaatgcgccatgcagtatgcata
ttttatctggttctccgagctctggacactctggaagatgacatgacaatcagtatagaa
aaaaagcttccactgttacacaactttcactcttacctttatgaacctgactggcggtac
atggaaagcaaggagaaggatcgacaagtgctagaggatttcccaacgatctcccttgag
tttagaaatctggctgtgaagtatcaaacagtgattgtcgacatttgccggaaaatggga
tttgggatggcagagtttttggataagcacgtgacgtccgaagaggagtgggacaagtat
tgtcactatgttgctggactggtgggaattggcctttcccgtctattctcggcctcagag
ttagaagaccccgtagttggtgaagacatagagtgtgccaactctatgggcctgtttctg
cagaaaacaaacatcattcgtgattatctggaagatcagcaagatggaagagagttctgg
cctcaagaggtttggagcaagtatgttaagaagttgggtgattttgctaagccagagaat
gtagacttggctgtgcagtgcctgaatgagcttataaccaatgcactacgccacattcca
gatgtcatcacctacctttccaggcttcgaaaccaaagtgtgtttaacttttgtgcgatt
ccgcaggtaatggccattgctactttggctgcctgttataataatcagcaggtgttcaaa
ggggtagtgaagattcgaaaaggacaagcagtaaccctaatgatggatgccaccaacatg
ccagctgtcaaagctataatataccagtacatggaagagatctatcatagaatccccaac
tcggactcatcttctagtaaaacaaggcagatcatctccacgatcaggacacagaatctt
cccagttgtcagctggtctcccgaagccattactcccctatttacctgtcatttcttatg
cttttggctgccctgagctggcagtatgtgagcaccctgtcccaggtcacagaagactat
gtccagaccggagaacactga
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