Miniopterus natalensis (Natal long-fingered bat): 107527531
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Entry
107527531 CDS
T05883
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107527531
Enzymes [BR:
mna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107527531
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107527531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
107527531
NCBI-ProteinID:
XP_016055794
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MASAPPMSYETSSPSNSESESESESESDTESDSSDDSETAESLSSFDQSEEEDHLSPEDV
IEEPASGQLPCEFEINEEKPSEVEATDDSSHDLEKPGLTKCKRILRSLSLKIWETLSKSK
IVSLLKDFVESEFFLIDGDSLLITCVLNMNFKKGQTLHFFYIVEQFLYDFIQKEAKFVIV
FFKDAENLYCDYPDILALRTILIHHLEYNTDVTIHTEFSNCLTPEWERFLKECYPYFLIV
SEKGLTSRQRDFLNIFIMHTLHKKINIVQSLGIESDVLRIYGYYSSSLYMHIQFFEMHEI
QLQHALHAYIIQNYQRSQEREILLYGHLKLNLGEMQKEIHQTLSLLHNQWPKGADIRSVV
CSISCAVTLKLYRKMLHGAQDCENLNTCTEDHNTKDLKEPPPINEAADLCRMHCLSIIFL
QHLPLCQRAKSRIITYVWDRTLTPFLRMLKRCQFFILKQLKARNNWNVNFTGLPDLTDDS
LWKNIAYYYEIEHNRGLNLELGDTLKQGYQELWNTILTLSEDDDFGGPMPMRTTLRPFLT
KKKTSPKGSNQEIHKLGLIPLKAEIIEDYAGDILSELPFLSSDDPAVTSLSKKKEFDELT
HWHSSRPLSDDFERTRCDSDTKSQNAKARRDMQKLHHFYHVFGKSLIGSDKSVRITRGRA
LPPPENSSVQKKKTHQTKAEKLIEKNQKRQLAKLEEKEEERWKNLSVCIKKEIKENPNSG
IKQLEDFLQTCPVNSVKFAAEMVGLDACFKLWMECCLKPEAESRDINIIINLMKRIHTIH
EKHSELLKNTHRQKLAKYLKYIGFDNLAHSLCPQVDATENITXHSYMRDTSKYSVHMGAA
RFQLTYMGPYLLREERSDPDPRVQHFIPDTWQRELLDVVDNNESAVIVAPTSSGKTYASY
YCMEKILRESDDGVIVYVAPTKALVNQVVGTICSLFTKALPKGLVVCGVFTRDYRHDALN
CQILVTVPQCLEILLLSPRNQMWVKRMRYVIFDEVHCLGGEIGAEVWEHLLVTIRCPFLA
LSATISNPEHLTEWLVSVKRYWQHVESTMENSGSSKNAMKVSRKQQRKIIEKPSHRVRLV
WYKERYNDLEKYVCSLKDDDFIIEHYHPCAALTVNHIKKYGIPLDLGFSPRESILLYDAM
VHIWPEWTRKQELEPEEFSCFKNKIVIMKADAKKYEEELKKEIIHWIQLDPSKVNQLLNY
LKPQTFDSPESEKQRMFPNFVEKLKEMNRLPAIFFSFNIHSVELSASRLLTNLISKQIAH
NDPNSEREKKILNKKLWKARKSQKRNIAAFFNSDSGARINRIILLSAEIKEIKRNLKKHY
QVPPDCTFTDRTIVDYQTLAKILRRLRGTRQAHKLHCLLRQGIGYHHGSMGSKERQVVEM
LFRLKHVKVVTATSTLALGINMPCKSVVFMEDSVFLDALNFRQMSGRAGRRGEDLIGNVF
FYGIPLPKIERLLKSNVPKLKGQFPLSITLVLRLMLLVAKAEDKEDAKAKALSILQHSLM
SFKQPKINCMLKFYFIYSLQFLIREEYLNQECIPIGYSGLVSHLHYHEPANFVLVSLLKK
RLFHKLCIPMKKKGPKSFSKKVMETLVVVLANLFGRRYLPPCVKNFKKKFSHSVVILDDL
PKEFAEVVEEHNNRIQENFGSFLLTISKLADMRKEYQLPLSEIDFSGKECEDSELVSHLM
PGTESRTAVSPFACLSNITDRDLFNIDVVNDAMLRTIDVHVKNIPFLWLNKYDTHGRKCP
LNGYVLNFYKNRSLSGLTLDNWLNMGDAFTLIRDFALTVQSIRISLSELCDDEDDNVVLA
FKQLIKAFSSILGKKAIG
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcacctcctatgtcatatgaaacatcaagccctagtaacagtgaaagtgag
agtgagagtgagagtgagagtgatactgaaagcgacagctctgatgacagtgagaccgca
gagagcttgtcctcatttgatcaatctgaagaagaagatcatctaagcccagaagacgta
atagaagagccagcttctgggcagttaccatgtgagtttgaaatcaatgaggagaagcct
tcagaagttgaagctacagatgacagcagtcatgatttagaaaaaccaggattaactaag
tgtaagagaattctgaggtcgctctcattgaagatttgggaaactctgtcaaaatctaaa
atagtgagcttacttaaagactttgttgagtctgaattttttttgattgatggagattca
ttactcatcacctgtgttctgaacatgaacttcaagaaaggacaaactcttcacttcttc
tacattgtagaacaatttctgtatgatttcattcaaaaggaagccaaatttgtcatagtt
ttttttaaggatgcagaaaatctgtattgtgattaccctgatattctggcccttcgtacc
atattgattcaccatttagaatacaacactgatgttactattcatacagaattttccaac
tgtctgacaccagaatgggagagatttcttaaagaatgttatccatatttcctaattgtc
tcagaaaagggactaacatctcgtcaaagagactttttaaatatttttatcatgcatact
cttcacaagaaaatcaatattgtacagtctttgggaatagaatcagatgtccttagaatt
tatggatactattcctcaagtctctatatgcacatacagttttttgaaatgcatgagata
caattgcaacatgccttacatgcctacataatacagaattaccaaaggtcacaggaaaga
gaaatacttctgtatggtcatttgaaactaaacttgggagaaatgcagaaagagatacat
cagaccttgtccttgcttcacaatcagtggcccaaaggggctgatataagaagtgttgtc
tgctctatttcatgtgctgtgacactaaaactctatagaaaaatgttacatggtgcacaa
gactgtgaaaacctaaacacctgcacagaagatcataacactaaggacttgaaggaacca
ccaccaattaatgaagcagcagatctctgcagaatgcactgtcttagtatcattttcctt
cagcatttacccctatgtcaaagagctaagagtagaatcattacttatgtttgggacaga
acacttacaccatttctaagaatgctaaagagatgtcaatttttcatcctaaaacaacta
aaagctaggaataattggaatgtgaatttcactggcctgcctgacttaactgatgatagt
ttgtggaaaaatattgcttattattatgaaattgaacataatagagggctaaatttggaa
ttgggtgacactttgaaacagggctatcaggaattgtggaacacaatcttaacgttatca
gaggatgatgattttggaggacccatgcccatgaggacaacgctcagaccatttcttaca
aagaagaaaacatcacctaaaggatcaaatcaagaaattcataaattaggactcattcct
ttgaaggctgagattatagaagattatgctggagatatcttgtcagaactaccttttcta
agcagtgatgacccagctgttacatctctttctaagaagaaagaatttgatgaactcaca
cactggcattcttctagacctctcagtgatgattttgaacggacgaggtgcgacagtgac
actaaatcccaaaatgccaaagcaagaagggacatgcagaaattacatcatttttatcat
gtctttggaaaatctttgataggaagtgacaaatcagtaaggattacaagaggaagagct
ctgccacctccagaaaattcttcagtgcaaaagaaaaaaacacaccagacaaaggcagaa
aaacttattgagaaaaaccaaaagagacagctagctaaactagaggaaaaagaggaagaa
agatggaaaaacttatctgtatgtattaaaaaggaaattaaagaaaatcctaattctgga
ataaaacaactggaagattttctccaaacatgccctgttaactctgtaaaattcgctgca
gaaatggtaggattggatgcctgtttcaaattatggatggaatgctgtttaaaaccagaa
gcagaatccagagatataaacataataattaacttgatgaaaaggattcatacaatccat
gaaaaacattcagaactattaaaaaatacacatcgacaaaaattagccaaatacctaaaa
tacattggatttgacaatttggcgcattcattatgtcctcaggtagatgctacagaaaat
attacgtgacattcctatatgcgtgatacttctaaatattcagttcatatgggagcagct
cgatttcagttaacatatatgggcccttacttacttcgagaagaaagaagtgatccagat
cccagggtgcaacattttataccagacacatggcagagggaactccttgatgtcgtagat
aataatgaatctgctgtaattgttgccccgacttcatccgggaaaacctatgcttcttac
tactgcatggagaaaatcctgagagagagtgatgacggggtgattgtgtatgttgctcca
acaaaggctctggttaatcaagtggtaggaactatctgcagtttatttaccaaagctctg
ccaaaaggattggtggtgtgtggagtgtttacaagagattaccgtcatgacgccttgaat
tgtcagatattggtgacagtgcctcagtgtttggaaatactcttgctatcacctcgtaat
caaatgtgggtgaaaaggatgagatatgtcatttttgatgaggttcactgtcttggggga
gaaattggagctgaagtttgggaacatcttcttgttacaattcggtgtccatttctggca
ctttctgctactatcagtaatcctgagcatctcactgagtggttggtgtcagttaaaaga
tactggcaacatgttgaaagcacaatggaaaattctggttcatcgaaaaatgccatgaaa
gtttcaaggaaacaacaaagaaaaataatagaaaagccatcacacagagttagactggta
tggtacaaagagcgatacaatgatctagagaagtacgtgtgttccctaaaggatgatgac
tttatcattgaacactatcacccatgtgctgcacttacagtcaaccatataaagaaatat
ggaatccctttagacctgggattttctccaagggaaagcatactgctttatgatgcaatg
gtacacatttggccagaatggacaagaaagcaggagctagaacctgaagaattcagctgc
ttcaaaaataaaatagtcattatgaaggcagatgccaagaaatatgaagaggaactgaaa
aaggaaataattcattggattcagctggacccaagcaaggtgaatcagttgttgaattac
cttaagcctcaaacttttgacagtccagaaagtgaaaagcaaagaatgtttcctaatttt
gtggaaaaacttaaagagatgaataggctgcctgcaatatttttttcatttaacattcac
tcagtggaattatcagcctcacgacttcttactaatttgataagcaaacaaattgctcat
aatgatccaaattctgaaagagagaagaaaattttgaacaaaaaactatggaaagcaaga
aagtctcaaaaaagaaacattgctgctttctttaattcagattcaggtgctagaattaac
agaatcattttattgtcagctgaaataaaggaaattaaaagaaaccttaagaagcattat
caagttcctccagactgtacttttactgaccgtacaattgtggattatcagactttagca
aagatcttacgcagactgcgaggaacaagacaagcccacaaactgcactgtctgttaagg
cagggcattggatatcatcacggttcgatgggctctaaagaaagacaagttgtagagatg
cttttcagactgaagcatgtcaaggtggtaacagctacttccacccttgctttgggaatt
aatatgccatgtaaatctgttgtttttatggaagattctgtttttttggatgccttgaac
tttcgacagatgtctggtcgtgcaggaagacgtggagaggatcttataggaaatgtattc
ttctatggtattccattaccgaagatagaaaggctcctaaagtcaaatgtgcccaaacta
aagggtcaatttcctctaagcataaccttggttctcagactcatgcttttagttgccaaa
gcagaggacaaggaggatgccaaagcaaaggcattatcgatcctccaacattcattgatg
tccttcaagcaaccgaagatcaattgcatgttaaagttttactttatatattctttgcaa
ttcttgatcagagaggaatacctgaatcaagaatgtattcccattggatattctggtctt
gtgtcacatttgcactaccatgaacctgcaaactttgttttagtaagcttgctgaagaaa
cgtttatttcacaagttgtgtattccaatgaagaaaaaaggcccaaagagcttttctaag
aaagtgatggaaactttagtggtggtgttagccaatcttttcggaagacgatatcttcct
ccctgtgtgaaaaactttaaaaagaaattttcacattcagtggtaattctagatgatctt
cccaaggaatttgccgaagtggtagaggaacacaacaacagaattcaagagaattttggc
tccttcctcctaacgatttctaagttggctgacatgaggaaagaataccaactacctctc
tcagaaattgacttttcaggtaaagaatgtgaagactctgaactggtctctcacttgatg
cctgggactgagagcagaactgctgtctccccatttgcttgcctgtccaatataacggat
cgggatttatttaatattgatgtggtcaatgatgctatgttacgaacgattgatgtccat
gttaaaaatattcctttcctttggttgaataaatatgatacgcatggaaggaagtgtcct
ttgaatggttatgtattgaacttctacaaaaaccgctccctgtcaggactcactttggat
aactggttaaatatgggagatgcttttactttaatcagagattttgcacttactgttcag
tccatcaggatttcactgagtgaattatgtgatgacgaagatgacaatgttgtgttagca
tttaaacaactaattaaagcattcagttcaatcttaggaaaaaaagcaataggctga
DBGET
integrated database retrieval system
