Miniopterus natalensis (Natal long-fingered bat): 107528223
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Entry
107528223 CDS
T05883
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna04151
PI3K-Akt signaling pathway
mna04510
Focal adhesion
mna04512
ECM-receptor interaction
mna04974
Protein digestion and absorption
mna05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107528223 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107528223 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107528223 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
107528223 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
107528223 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mna00536
]
107528223 (COL2A1)
Glycosaminoglycan binding proteins [BR:
mna00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107528223 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
107528223
NCBI-ProteinID:
XP_016056679
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAVGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPSGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGAPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGETGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGGREKGPDPMQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
ccccctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgcggtgacaaa
ggtgaaaaaggtgctcctggacctcgtggcagagatggagagcctgggacccctggaaat
cctggcccccctggccctcccgggccccctggcccccctggccttggtggaaactttgct
gcccagatggctggtggatttgatgagaaggctggtggtgcccagatgggagtgatgcaa
ggaccaatgggccccatgggacctcgaggacctccaggccctgctggtgctcccggacct
caaggatttcaaggcaaccctggtgaacctggggaacccggcgtctctggtcccatgggt
ccccgtggtcctccaggcccccctggaaaacctggtgatgatggtgaagctggaaagcct
ggaaaatctggtgaaagaggccctcccggccctcagggtgctcggggcttcccaggaacc
cccggcctacctggtgtcaaaggtcacagaggttacccaggcctggatggtgctaagggt
gaagctggtgctccaggtgtgaagggagagagtggttcccctggtgagaatggctctccg
ggccccatgggtccccgtggcctgcctggtgagagaggaaggactggccctgcaggtgct
gtgggtgcccggggcaatgatggtcaaccaggccctgcagggcctccgggtcccgtgggt
cctgctggcggccctggcttccctggggctcccggtgccaagggagaagctggtcccacc
ggtgctcgtggtcctgaaggcgctcaaggtcctcgcggtgaacctggcactcctgggtcc
cccggaccggctggcgcctctggtaaccccggaacagatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgctcccggcttccctgggccccggggtcctcct
ggccctcaaggtgcaactggtcctttgggcccgaaaggtcagacgggtgagcctggtatt
gctggcttcaaaggtgaacaaggccccaagggagaacctggccccgcaggcccccaagga
gcccctggtcctgctggtgaagaaggcaaaagaggcgcccgaggagagcctggtggcgct
gggcccatcggcccccctggagaaagaggtgctcctggcaaccgtggtttccctggtcaa
gatggtctggcaggtcccaagggagcccctggagagcgaggccccagtggccttgctggc
cccaagggagccaatggtgaccctggccgccccggagagcctggccttcctggagcccgg
ggtctcactggccgtcctggtgatgctggtcctcaaggcaaagttggtccttctggagcc
cctggtgaagatggtcgccctggacctccaggtcctcagggggctcgtgggcagccaggt
gtcatgggtttccctggccccaaaggtgccaatggcgagcctgggaaagctggtgagaaa
ggactgcctggtgctcctggtctgagaggtcttcctggcaaagatggtgagacaggtgct
gcaggcccccctggacctgctggaccttctggtgaacgaggcgagcagggtgctcctgga
ccatctggtttccagggccttcctggccctcctggtcccccaggtgaaggtggaaaacca
ggtgaccagggcgttcccggtgaagctggagcccccggccttgtgggtcccagaggtgaa
cgaggtttcccaggtgaacgtggctctccaggtgcccagggcctccagggtccccgtggc
ctccccggcactcccggcactgatggtcccaaaggtgcatctggcccagctggtccccct
ggggctcagggccctccaggtctgcaggggatgccgggtgagagaggagcagctggtatt
tctgggcccaagggagacaggggtgatgttggtgagaaaggcccagagggagcccctggg
aaggatggtggacgaggtctgacaggtcccattgggccccctggcccagctggtgccaac
ggtgagaagggagaagttggccctcctggtcccgcgggaacagctggtgctcgtggcgcc
ccgggcgaacgtggagagactggacctcccggacccgctggatttgctggtcctcccggt
gctgacggccagccaggtgccaagggtgagcaaggagaggccggccagaaaggtgacgct
ggtgccccaggtcctcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggcgctcaaggccccccgggagccaccggattccccgga
gctgctggtcgcgttggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtggtccccctggcaga
gctggtgatcctggcctccaaggtcctgccggagcccctggcgagaagggagagcctgga
gatgacggtccctctggtcctgatggtcctccaggtccccagggtctggctggtcagagg
ggcatagttggtctgcccgggcagcgtggtgagagaggctttcccggcttgcctggccca
tcgggtgagcctggcaagcagggagctcctggtgcatctggagaccgaggtccccctggc
cctgtgggtccccctggccttactggtcctgctggtgaacctggacgagagggaagccct
ggtgctgacgggccccctggcagagatggtgcagctggagtcaagggtgatcgtggtgag
actggtcccttgggtgctcctggagcccctgggccccccggctctcctggccccgccggc
ccaactggcaaacagggagaccgaggagaagctggtgcacaaggccccatgggacccgca
ggaccggctggagcccgaggaatcccaggccctcaaggcccccgaggtgacaaaggagaa
actggagaggctggcgagaggggactgaaggggcaccgtggcttcactggtctgcagggt
cttcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccctgttggtccctctggcaaagatggcgctaatggaatc
cctggccccattggacctcctggtccccgtggacgttcaggcgaaacaggccctgctggt
cctcctggaaaccctggaccccctggccctccaggcccccctggccctggcattgacatg
tcagccttcgctggcttaggtgggagagagaaaggccctgatcccatgcagtacatgcgg
gccgaccaggcggctggcaacctgaggcagcatgatgccgaggtggatgccacgctcaag
tccctcaacaaccagattgagagtatccgcagccctgagggctctcgcaagaaccctgct
cgcacctgccgggacctgaaactctgccaccccgaatggaagagcggagactactggatc
gaccccaaccagggctgcaccttggatgccatgaaggttttctgcaacatggagactggt
gagacctgcgtctaccccaacccagcgaatgtccccaagaagaactggtggagcagcaag
agcaaagacaagaaacacatctggtttggagaaaccatcaacggcggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctgcgcctg
ttgtccaccgagggctcccagaacatcacttaccactgcaagaacagcatcgcctacctg
gacgaagcagctggcaacctcaagaaggccctgctcatccagggctccaacgacgtggag
atccgggctgagggcaacagcaggttcacatatacggttctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgcctc
cctatcattgacattgcacccatggacataggagggcccgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
