Miniopterus natalensis (Natal long-fingered bat): 107528436
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Entry
107528436 CDS
T05883
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107528436 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107528436 (CNOT6)
Enzymes [BR:
mna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107528436 (CNOT6)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107528436 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107528436 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_8
LRR_1
LRR_6
Motif
Other DBs
NCBI-GeneID:
107528436
NCBI-ProteinID:
XP_016056998
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGRVRSLSSSLWSLTHLTALHLSD
NFLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYLEPDGTKRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLHSSVLGEFGNIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgaaccccctgaccctcggaggatgtacacaattatgtcctct
gaggaagcagcaaatggaaagaaatcacattgggcagagcttgaaataagtggaagagta
agaagcttaagctcatctttgtggtcactaactcacctgacagctttgcatctgagtgac
aattttctgtcccgcattccgtcagacattgccaagcttcacaatctggtgtatctggac
ctgtcctcgaataaaatcaggagtttaccggcagaactcggaaacatggtatcactcagg
gaactccatttaaataacaacctgttacgagttctaccttttgagctggggaaactgttt
cagttgcagactttaggcctaaaaggaaatccacttacccaggatatactgaacctctat
ctggaaccagatggaacaaaaaggctacttaactatttgcttgataatttggcaggtact
gcaaaaagaatttcaacagaacaaccacctccaagatcttggattatgttacaagaacca
gaccgaacaaggccaactgccttgttttctgtcatgtgctataacgttctttgtgataaa
tatgcgacccggcagttatatggctactgcccatcatgggcactaaattgggattacagg
aaaaaggccattattcaagaaatcttgagctgcaatgctgacatcataagtcttcaggag
gttgaaacagaacagtattacagtttttttctggtagaactgaaagaacgtggttataat
ggattttttagtcctaaatctagagctaggacaatgtcagaacaagaaagaaagcatgtt
gatggctgtgcaatattcttcaagacagaaaaatttactttggttcagaaacacactgtt
gaatttaatcagctagcaatggcaaattcagaagggtctgaagctatgctgaacagagtc
atgacaaaagataacattggagttgcagtactactagaacttcgaaaggaattgattgaa
atgtcatctggaaagccacatcttggaacagaaaaacaacttattcttgtggctaatgct
catatgcattgggaccctgaatactctgatgtgaagttagtccaaacgatgatgtttctc
tcagaagtgaagaacattattgataaagcctcacgaagcctccactccagtgtattggga
gaatttggaaatattccactggtgttgtgtgcagatcttaattctttgccagactctggt
gttgtagaatatttgagcactggtggagtagaaacaaatcataaagactttaaggaacta
agatataatgaaagtcttacaaacttcagctgtaatgggaaaaatgggacaaccaatgga
aggatcacgcacggtttcaagttaaagagtgcctatgagagtggcctgatgccttacaca
aattacacgtttgatttcaagggtataattgactacatcttctattctaagcctcagctc
aacacattaggcatcctgggacctctggaccaccattggctagttgagaataatatcagc
ggctgcccacacccgcttatcccctccgaccacttctcactttttgcacaactggagctc
ttactgcctttcctgcctcaagttaacggcattcaccttcctggcaggaggtag
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