Miniopterus natalensis (Natal long-fingered bat): 107529415
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Entry
107529415 CDS
T05883
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03082
ATP-dependent chromatin remodeling
mna04714
Thermogenesis
mna05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107529415 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
107529415 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
107529415 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mna03021
]
107529415 (SMARCC1)
03036 Chromosome and associated proteins [BR:
mna03036
]
107529415 (SMARCC1)
Transcription machinery [BR:
mna03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107529415 (SMARCC1)
Chromosome and associated proteins [BR:
mna03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107529415 (SMARCC1)
PBAF complex
107529415 (SMARCC1)
GBAF(ncBAF) complex
107529415 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
107529415
NCBI-ProteinID:
XP_016058280
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPN
IYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQV
LVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHAKWVLDTDVFNEWMNEEDYEVDE
NRKPVSSRQRLSARSDEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQA
SLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLD
EQDEETVTTGGKEDEDPSKGDQSRSVDTGEDNVTEQTNHIIIPSYASWFDYNCIHVIERR
ALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFL
EQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKN
KEKPIDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHV
GSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPR
VASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDE
PEKLEGAEEEKMETDTDGQQPEKAESKGERETEEGDRAQDGGNDKSSEKEQDGEVSEEIK
SEEKETDENKELTDTCKERERDLGKKRVEHEISEGNVATAAAAALASAATKAKHLAAVEE
RKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKY
AELRARQQMEQQHGQNPPQGHQHSGGPGLVPLGAAGHPSMMPHQQPPPYPLLQHQMPPPH
PPQPGQIPGPGSMIPGQPMPGRMIPTVAANIHPPGSGPTPPGMPPMPGSILGPRVTLTAP
NGMYPPPPQQQQPPPADGVPPPPAPGPPASAAP
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggcaccttgtgtcacattcttggggctgcttacaagtataaa
aatgaacagggatggcggaggtttgatctacagaatccatcccgaatggatcgtaacgtt
gagatgtttatgaatattgaaaaaacattggtgcagagcaattgtctcaccagacccaac
atctacctcattccagacattgatttgaagttggctaacaaactgaaagatattatcaaa
cgacatcaggggacatttactgatgagaagtcaaaagcttcccaccacatttatccgtat
ccttcctcacaggaagatgaagagtggctgagacctgtgatgagaaaggacaagcaggtg
ttagtacactggggattttaccctgacagctatgatacttgggttcatagtaatgatgtt
gatgcagaaattgaagatccaccaattccagaaaagccatggaaggttcatgcaaaatgg
gttttggacactgatgtcttcaatgaatggatgaatgaggaggactacgaggtggatgag
aaccggaagccagtgagttcccgacagcgcctctcagccaggagtgacgagccagtgaga
agtcccgagagaagagatagaaaagcatcagctaatgctcgaaagaggaaacattctcct
tcccctccacctcccacacccacagagtcacggaagaagagtgggaagaaaggccaagcc
agtctttatgggaagcgcagaagtcagaaggaggaagatgaacaggaagatcttaccaag
gatatggaagacccaacacctgtacccaacatagaggaagtggtacttccaaaaaatgta
aatccaaagaaagatagtgaaaatacacctgttaaaggaggaactgtagccgatctagat
gagcaggatgaagaaaccgtcacaacaggaggaaaggaagatgaagatcccagcaaaggt
gatcagagccgatcagttgatactggtgaagataacgtgacagagcagaccaaccacatc
atcattcccagctatgcatcgtggtttgattataactgtattcacgtaattgaacggcgt
gcccttcctgagtttttcaatggaaaaaacaaatccaagactccagagatatacttggca
tatcgaaattttatgattgacacataccgcctaaacccccaagaatatttgaccagcact
gcttgtcggaggaacttgactggagatgtgtgtgctgtgatgagggttcatgccttttta
gagcagtggggtcttgtcaattaccaagtggatccagaaagtcgacccatggcaatggga
cctcctcctacccctcatttcaatgtattggctgataccccttctgggcttgtgcctctg
catcttcgatcacctcaggttcctgctgctcagcagatgttaaattttcctgagaagaac
aaggaaaaacctattgatttgcagaactttggtctccgtactgacatttactccaaaaaa
accttggcaaagagtaaaggtgctagtgctggaagagagtggactgagcaggagaccctg
ctacttctggaggccctagagatgtacaaggatgattggaacaaagtgtcagaacatgtt
ggaagtcggactcaggatgagtgcatcctccactttttgaggcttcccatcgaggaccca
tacctggagaactcagatgcttccctcgggcccctggcctaccagcctgtccccttcagt
cagtcaggaaacccagtcatgagcactgtcgcctttttggcatctgtggtggaccctcgt
gtggcatctgctgcagcaaaagcggctttggaggagttttctcgagtccgggaggaggta
ccactggaattggttgaagctcatgtcaagaaagtacaagaagcagctcgagcctctggg
aaagtcgatcccacctacggcctggagagcagttgcattgcaggcacggggcccgatgag
ccagaaaagcttgaaggagctgaagaggaaaaaatggaaacagatactgatggtcagcag
cctgaaaaggcggaaagcaaaggggaaagggaaacggaagaaggcgacagagcacaggac
ggaggcaacgacaaaagcagcgagaaggagcaggacggtgaagttagcgaggagatcaag
tcagaggaaaaggagactgacgagaacaaggagctcactgacacttgtaaagaaagagaa
agggaccttgggaagaagagagtagaacacgaaatttctgaaggaaacgtagccacagcc
gcagcagctgctctggcctcagctgcaaccaaagccaagcacctggcagccgtggaagag
aggaagatcaagtccctggtcgcgctcctggtggagacacagatgaagaaactggagatc
aaacttcggcattttgaggagctggagacgatcatggacagagagaaagaggccttagag
cagcagaggcagcagttgcttactgaacgccagaacttccacatggagcagctgaaatat
gcagagttgcgagcccgccagcaaatggagcagcagcatgggcagaaccctccacaggga
caccagcactcaggagggcctggcctggtgccgctgggggcagcagggcaccccagcatg
atgcctcaccagcagcccccaccctaccctctgctgcagcaccagatgccaccgccccac
ccgccccagccaggtcagataccaggtccaggttccatgatacctgggcagcccatgcca
ggtcgcatgattcccactgttgcagccaacatccacccccctgggagtggccctacccct
cctggaatgccgccaatgccaggaagcatcttagggccccgggtaaccctcacggcacct
aatggcatgtatccccctccgccgcagcagcagcagccgccacctgcagatggagtccct
ccacctcctgctccaggcccacctgcctcggccgcaccctag
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