Miniopterus natalensis (Natal long-fingered bat): 107530247
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Entry
107530247 CDS
T05883
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03013
Nucleocytoplasmic transport
mna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107530247 (UPF2)
03015 mRNA surveillance pathway
107530247 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107530247 (UPF2)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107530247 (UPF2)
mRNA cycle factors
P-body specific factors
107530247 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
107530247
NCBI-ProteinID:
XP_016059415
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MPAERKKPASMEEKESLLNNKEKDCGERRPVNSREKPKDEIKLPAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEERKKQEEQAKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYVDFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLTFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSQNKESNKDDSKEAKEPKDNKEVSNPDDLELELENLEINDDTLELEGADEAED
LTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRK
KLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIET
KNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHL
RTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKD
LSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVG
IHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVN
PDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEIW
TKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEQEFLIKLGLVNDKDSKDS
MTEGENLEDDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDEDEGEEEEEENTDYLTDS
NKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAI
PLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQ
QAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNAD
LIFKTGGRRR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttgctaaacaac
aaggaaaaagactgtggtgaaaggcggccagtgaacagcagggagaaaccaaaagacgag
atcaagctccctgccaagaaggaggttattaaggtccctgaagataaaaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgcaagaaaaaagaagaagaaaaggta
aaggcggaagaggagttaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagagaaagaagcaagaagagcaggcaaaacgacagcaagaggaagaagctgcccagttg
aaggagaaagaggaatctcttcagcttcatcaggaagcttgggaacgacatcagttaaga
aaggaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgactagactcaagtttgaagaaaaatactgcttttgtcaagaaactaaaaactatt
acggaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaagctgtagcttctattgtggaagcaaagctaaaaatatctgatgtgaattgt
gctgtgcacttatgctctttgtttcaccagcgttatgtcgactttgccccatcacttctg
caggtttggaaaaaacattttgaagcaaggaaagaagagaaaacacctaacattaccaaa
ttgagaactgatttgcgtttcattgcggaattgacaatagttgggattttcactgacaag
gagggtctttctttaatctatgaacagctaaaaaatattattaatgctgatcgggaatca
catactcatgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctgga
cttgtaccaaggaaagtaaagagtgctgcagagaagtttaatttgacttttcctcctagt
gagataattagtccagagaaacaacaacctttccagaatcttttaaaagaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacagaatactgagagacaaaac
aggcgtattctacattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttatcagaagctactggcaaattctcaatccttagcagatcttttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatgggcctggaatt
gatatatttacacctggtaaacctggagaatatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgagaacctcattgatttgaaagcttttgttccagccatc
ttatttaaagataatgaaaaaagtcagaataaagagtccaacaaagatgattctaaagag
gcaaaagaacctaaggataataaggaggtatcaaatcctgatgatttggaacttgagttg
gagaatctagaaattaatgatgacaccttagagttagagggtgcagatgaagctgaagat
cttacaaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcactggatct
catctcaagctcatagtagatgctttcctccagcaattgcccaactgtgtcaaccgagat
cttatagacaaggcagcaatggatttttgcatgaacatgaacacaaaagcaaataggaag
aagttggtacgggcactctttatagttcccagacaaaggttggatttgctaccattttat
gcgagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgttcc
atgctgagaggggatttcagatttcatgtgcgaaaaaaggaccagatcaatattgaaaca
aagaacaaaactgttcgttttattggagaactaactaagtttaagatgttcacaaaaaat
gatacactgcattgtttaaagatgcttctctcagatttttcccatcaccatattgaaatg
gcatgcaccctactggaaacatgtggaagatttcttttcagatctccagaatctcacttg
aggaccagtgtacttttggaacaaatgatgagaaagaaacaagcaatgcatcttgatgca
agatatgtcacaatggtggagaatgcatattactactgcaacccacctccagctgaaaaa
acagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttgtacaaggat
ctttccaaggttaccactgagaaggttttgagacagatgcgaaagttaccctggcaggac
caagaagtgaaagactatgttatttgttgtatgataaacatctggaatgtgaaatacaat
agtattcattgtgtggccaacctcttagcaggactagtgctctaccaagaagatgttgga
atccatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcaacct
aaatttaatcagagacgtatcagcagtgccaagttcttaggggaactttataattaccga
atggtggaatcagctgttatttttagaactctttattcttttacttcatttggtgttaac
cctgatggctctccaagttcactggaccctcctgagcaccttttcagaattagactagtg
tgcactattttggatacctgtggccagtactttgacagaggttccagtaaacgaaaactt
gattgcttccttgtatattttcagcgttatgtttggtggaagaaaagtttggagatttgg
acaaaagatcatccatttcctattgacatagattacatgatcagtgatacattagaactg
ctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacacgac
ttggaacaagaattcttgataaaactaggcctagtaaatgacaaagattcaaaagattct
atgacagaaggagaaaatcttgaagatgatgaagaagaagaagaaggaggagctgaaaca
gaagaacaatctggaaatgaaagtgaagtaaatgaaccagaagaagaggagggttctgat
aatgatgaggatgaaggagaggaagaagaggaagagaatacagattatcttacagattca
aataaggagaatgaaaccgatgaagaaaataccgaggtaatgatcaaaggaggtggactt
aagcatgttccttgtgtagaagatgaggacttcattcaagctctggataaaatgatgcta
gaaaatctccagcaacgaagtggtgaatctgttaaagtgcatcagcttgatgttgctatt
cccttgcatctcaaaagtcaactgaggaaagggcctccacttggtggtggggaaggagag
gcagaatccgcagacacgatgccatttgtcatgttaacaagaaaaggcaataaacagcag
tttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcattggaaccagcaa
caggcagaacaagaagaaaggatgagaatgaaaaagctcacactagatatcaatgaacga
caagaacaagaagattatcaagaaatgctgcagtctcttgcccagcgcccagctccagca
aacaccaatcgtgagcggcggccccgttaccaacatccaaagggagcgcctaatgctgat
ctaatctttaagactggtgggaggagacgttga
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