Miniopterus natalensis (Natal long-fingered bat): 107530615
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Entry
107530615 CDS
T05883
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107530615 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mna03041
]
107530615 (DDX42)
Enzymes [BR:
mna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107530615 (DDX42)
Spliceosome [BR:
mna03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
107530615 (DDX42)
Complex B
107530615 (DDX42)
Complex C
U2 SnRNP specific factors
107530615 (DDX42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
107530615
NCBI-ProteinID:
XP_016059976
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITSLTPQQLIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
ISDFKKKDIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENTDRGNNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQ
KAGSSAAGASGWTSAGSLNSVPTNSAQQGLNSPDSPVASATKGIPGFGNTGNISSAPVTY
PTAGAQGVNSASGNNSREGIGGNNGKRERYTENRGGSRHSHGESGSGNRHGDSPRHGDSG
RHGDGYRYPESSSRHADSHRHGENRHGGGGGRHGESRGANDGRNGESRKEGCNRENKMDP
KVDSSKIDKMDSKTDKTADGFAVPEPPKRKKSRWDS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggccctggcactaaaaggggatttggctttggaggttttgcc
attagtgctggaaagaaggaggaaccaaaacttccacaacagtcccacagtgcctttggg
gcaaccagctcttcttctggatttggaaagtcggctccgccacagctcccttctttctac
aaaattggatctaaacgggccaattttgatgaagaaaatgcatactttgaagatgaggaa
gaagactccagcaatgttgatttaccttatattcctgctgaaaactcccctacccgccag
cagttccattccaagccagcagattctgacagcgatgatgatcccttggaggcattcatg
gctgaagtggaagatcaggcggctagagacatgaagaggcttgaagaaaaggacaaggaa
agaaaaaacgtaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcggtacatggcagagaacccaactgctggtgtagttcaagaggaagaggaagataat
ttggaatatgatagtgatggaaatccaattgcaccttccaaaaaaatcattgatcctctt
cctcccattgaccattcagagattgactatccaccatttgaaaaaaatttttacaatgag
catgaagagataaccagcctcaccccacagcagctaatagatctccggcataagctcaat
cttcgggtctctggtgctgcacctcctagaccaggaagtagttttgctcattttgggttt
gatgaacaacttatgcaccagattcggaaatccgaatacacacagcccactccaatacag
tgccagggtgtgcctgtggcattaagtggtagagacatgattggtattgccaaaacaggc
agtgggaaaactgcagcctttatctggcccatgctgattcatataatggaccagaaggaa
ctggaaccaggtgatggaccaattgcagtgattgtgtgtcctacaagggagctttgccag
cagatccatgcagaatgtaagcggtttgggaaagcatataatcttcgatcggtggccgtg
tatggaggagggagcatgtgggagcaggccaaggcccttcaggaaggggcagagattgtt
gtgtgtaccccaggccgactgattgatcatgtgaagaagaaagctactaatcttcaaaga
gtctcttaccttgtgtttgatgaagcagatcgtatgtttgacatgggatttgagtaccag
gtgcgatccatagccagtcatgtccgtcctgacagacaaactctcttattcagtgcaact
tttcggaaaaagattgaaaaactggccagagatatcctgatcgaccctattcgagtggtg
cagggagatattggagaggcgaatgaagatgtgacacagattgtggagattctccattcc
gggcctagtaaatggaactggcttacccgacgtcttgtcgaatttacatcttcagggagt
gtcctcctgtttgttactaaaaaagccaatgctgaggagctagccaataaccttaaacag
gagggccataatcttgggctgcttcatggggacatggatcagagtgaaaggaacaaggtc
atctcagactttaagaaaaaggacatccccatcctggtggccacagatgttgcagcccgt
ggtctggacattccttcaattaagactgtcattaactatgatgtggctcgagacattgat
acacatactcataggattggccgcacaggacgagcgggtgagaagggtgtggcctatacc
ttgctgacccccaaggacagtaattttgctggtgaccttgtccggaacttggaaggagcc
aaccaacatgtttctaaggaactcctagatctggcgatgcagaatgcctggtttcggaag
tcccgcttcaaaggagggaaaggcaagaagctgaacatcggtggaggcggcctaggctac
agggagcggccgggcctaggctctgagaacacggaccgaggaaataacaacaatgtaatg
agcaactatgaggcctacaagccttccacaggagccatgggagatcggctgacggcaatg
aaagcagctttccagtcacagtacaagagtcacttcgttgccgccagcttaagcaaccag
aaggctgggagttctgctgctggggcaagtggatggacaagtgcagggagcttgaattct
gttccaactaattcagcccagcagggccttaacagtcctgacagccctgttgccagtgcc
accaagggcattccaggctttggcaatactgggaacatcagcagtgcaccagtgacctac
cccactgccggagcccagggagtcaactcagcttcagggaataacagccgagaagggatt
gggggtaacaatgggaaaagagagagatacactgagaaccggggtggcagccgccatagc
catggagagagtggcagtggcaatcggcatggtgatagcccacgtcatggagacagtggt
cgccatggagatggataccgctatccggaaagcagcagccgtcatgctgatagccatcgt
catggggagaacaggcatggaggaggtggaggccgacatggggagagccgaggtgcaaat
gatggccggaatggtgaaagcaggaaagaaggttgtaaccgtgagaacaagatggacccc
aaggtggatagcagcaagatcgacaagatggacagcaagacagataagacagctgatggt
ttcgcagtccccgagccacccaagcgcaagaaaagtcggtgggacagttag
DBGET
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