Miniopterus natalensis (Natal long-fingered bat): 107530870
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Entry
107530870 CDS
T05883
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03015
mRNA surveillance pathway
mna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107530870 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
107530870 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107530870 (PABPC1L)
03041 Spliceosome [BR:
mna03041
]
107530870 (PABPC1L)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107530870 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
107530870 (PABPC1L)
Spliceosome [BR:
mna03041
]
Complex C
Other components
Complex C specific factors
107530870 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RBD_DEAH11
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107530870
NCBI-ProteinID:
XP_016060275
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MNASGPGFPLASLYVGDLHPDVTEAMLYEKFSPAGPILSMLFSPVRLRDWLFSFLLGFFG
RVLPIKHLRAQGVPLTCSFLSCPAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNI
FIKNLEESIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETREAAQQAISTMNGM
LLNDRKVFVSHFKSRQEREAELGARAVEFTNIYVKNLQVDVDEQGLEELFAQFGKMLSVK
VMRDDSGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGRLLYVGRAQKRAERHNELKRRFQ
QVKQVKQDRLNHYQGVNLYVKNLDDSIDNEKLRKEFSPYGVITSAKVMTEGGHSKGFGFV
CFSSPEEATKAVTEMNGCILGTKPLYVALAQRKEERKAILTNQFMQQRLSAMRALGGPLL
GSFQQPTSYFLPTLPQPPAQAAYYGSGPAVQPAPRWTAQPPRSSTTYSPAASEVWPPAMS
RCSPAYVSNVRKASTQVPHQMPHTQRVANIGTQTTGPDEAGCLTPSGPLLIQRYSLGVPN
THAVEEPAVCIPGQEPLTASMLAAAPPYKQKQMIGERLYPLIYDVYAQLAGKITGMLLEI
DNSELLLMLESPESLNAKVEEALAVLQAHQAAEEEEGE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggcccgggcttcccgcttgcctcgctctacgtgggcgacctgcacccc
gacgtgaccgaggccatgctctacgagaagttctcgcctgccgggcccatcctgtccatg
ctcttctctccagtgagactcagagactggctcttttcttttttgttgggtttttttgga
agggtgctcccaattaagcacctgagggctcagggagtccccttaacttgctcctttctc
tcctgtccagcggagcgggcactagacacaatgaactttgaggttatcaaaggccagccc
attcgcatcatgtggtcccagcgagacccaggacttcgcaagtcgggtgtgggcaacatc
ttcatcaagaacctggaagagtccattgacaacaaggccttatatgacaccttctccacc
tttgggaacatcctgtcttgcaaggtggtgtgtgacgatcacggctcccgaggctttggc
tttgtccattttgagacccgtgaggctgcacagcaggccatcagcaccatgaatgggatg
ctgctgaatgaccgcaaagtcttcgttagccacttcaagtcccgacaggagcgggaggct
gagctgggcgctcgggccgtggagttcaccaacatctatgtgaagaacctccaagtggac
gtggacgagcagggcctggaggagctctttgctcagtttgggaagatgctgagtgtgaag
gtgatgagggatgacagcggccactcccgaggctttggctttgtcaactttgaaaagcat
gaggaagcccagaaggccgtgatggacatgaatgggaaggaggtgagggggcggctgctc
tacgtgggccgggcccagaagcgggccgagcggcacaatgagctaaagcgaaggttccag
caggtgaagcaggtgaagcaggaccggctgaaccattaccagggcgtgaacctgtatgtg
aagaacctggatgactccattgacaatgagaaactgaggaaagagttctctccctacgga
gtgatcaccagtgccaaggtgatgacagagggtggccacagcaaagggtttggctttgtg
tgtttttcctctccagaagaggcaacgaaggccgtgacagagatgaacgggtgcatcctg
ggcaccaagccgctgtacgtggcgctggcccagcgcaaagaggagcggaaggccatcttg
accaaccagttcatgcagcagcgcctctctgccatgcgggccctaggtggccccctcctg
ggctccttccagcagcccaccagctactttctgcccaccctgccccagcctccagcccag
gctgcgtactatggctctggcccagctgtccagcctgcccccaggtggacggcccagcca
cctagatcctcgaccacctactctccagctgcctcagaggtctggccaccggccatgtct
cggtgctccccagcctacgtcagcaatgtcaggaaggcctccacccaggtgccacaccag
atgccccacacccaaagagtggccaacattggtacccagaccactggccctgatgaggca
ggatgccttacgccaagcgggcctctcctgatacagagatattccttgggagtgcccaac
acgcatgcggtcgaggagcctgctgtgtgcatccccggacaggagccgctgaccgcgtcc
atgctggccgcagcaccaccgtacaagcaaaagcagatgattggcgagcgtctctacccc
cttatctacgatgtctacgcccagctggctggcaagatcacaggcatgctgctggagata
gacaactcggagctgctgctcatgctggagtctccagagtccctcaatgccaaggtagaa
gaggctttggcagtgctgcaggctcaccaggccgctgaggaggaggagggggag
DBGET
integrated database retrieval system
