Miniopterus natalensis (Natal long-fingered bat): 107531507
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Entry
107531507 CDS
T05883
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107531507 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mna01009
]
107531507 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mna04515
]
107531507 (PCDH1)
Protein phosphatases and associated proteins [BR:
mna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107531507 (PCDH1)
Cell adhesion molecules [BR:
mna04515
]
Cadherins
Protocadherins
107531507 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
107531507
NCBI-ProteinID:
XP_016061054
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MGPLRPSPGPGGQRLPMPLLLLALLLLLLAPSPGHATQVVYKVPEEQPPNTLIGSLAADY
GFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQLPGEPCILEFEVSIT
DLMQNGSPRLLEGQIEVQDINDNTPNFALPVIPLPIPENTNIGSLFPIPVASDRDAGPNG
VASYELQAGPEAQELFGLQVAEDQDGKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRA
SSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIDYMFHQ
APEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMN
DNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQ
LRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVND
NAPVFTQSVTEVSFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAKGLFTISPET
GEIRVKTSLDREQRENYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSV
MENMPALSPVGMVTVIDGDKGENARVQLTVEQDNGDFVIQNGTGTILSSLSFDREQQSTY
TFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTA
EDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPP
RYGTALVHLYVNETLSNRTLLETLLGHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGV
VAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSGKASKGNKSKGKKSKSPKP
VKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQ
PQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTNPPKYPSKQLPHRRVTF
SATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEM
EHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDR
GGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPP
AATPASAQTAKREIYL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggggcccctgaggcccagcccaggccctggggggcaacggttgccgatgcccctgttg
ctgctggcactgctgctactcctgctggctccatccccaggccacgccacccaggtggtg
tacaaggtgccggaagaacagccacccaacaccctcattgggagcctcgcagctgactac
ggttttccagacgtgggccacctgtacaaactagaggtaggcgccccgtacctgcgggtg
gatggcaagacaggtgacatattcaccaccgagacctccatcgaccgcgaggggctccgt
gaatgccaaaaccagctccctggtgagccctgcatcctggagttcgaggtgtctatcacg
gacctcatgcagaatggcagtccccggctgctcgagggccagatagaagtacaggacatc
aatgacaacacacccaacttcgccttaccggtcatcccgctgcccatccctgagaacacc
aacattggctcactcttccccatcccagtggcttcagaccgtgatgctggccccaatggt
gtggcgtcctatgagctgcaggccggacctgaggcccaggagctatttggactgcaggtg
gcagaggaccaggacgggaaacagccacagctcatcgtgatgggcaacctggaccgggag
cgctgggactcctatgacctcaccatcaaggtgcaggatggtggcagccccccacgggcc
agcagtgccctgctgcgtgtcactgtgcttgacaccaatgacaacgcccccaaatttgag
cgaccgtcctacgaggctgagctgtctgagaacagcccaataggccactcggtcatccag
gtgaaggccaatgactcagaccaaggtgccaacgcagagatcgactacatgttccaccag
gcacccgaagttgtgaggcgtcttttgcgactggacaggaacactggacttatcactgtg
cagggccccgtggaccgtgaggacctaagtaccctgcgtttctcagtgcttgccaaggac
cgaggcaccaaccccaagagcgcccgtgcccaggtggtggtgactgtgaaggacatgaac
gacaacgctcccaccattgagatccggggcataggactggtgacccatcaagatgggatg
gctaacatctcagaggacgtggcagaggagacagctgtggccctggtgcaggtatctgac
cgagatgagggagagaatgcagctgtcacctgtgtggtagcaggtgacgtgcccttccag
ctacgtcaggccagtgagacgggaagtgacagcaagaagaagtacttcctgcagaccacc
acccccctcgactacgagaaagtcaaagactacaccattgagattgtggctgtggactct
ggcaacccccccctctctagcaccaactccctcaaggtgcaagtggtggatgtcaatgac
aatgcacctgtcttcacccagagcgtcacagaggtctccttcccggaaaacaacaagccg
ggtgaagtggtggctgaggtcactgccagtgacgccgactcgggctccaatgctgagctg
gtttactccctggagcctgagccggctgccaagggcctcttcaccatttcacctgagact
ggagagatccgggtaaagacatcccttgatcgggaacagcgggaaaactacgagttgaag
gtggtggcagccgaccggggcagccccagcctccagggcacagccaccgtcctcgtcaac
gtgctggactgcaatgacaatgaccccaagtttatgctgagtggctataacttctcggtg
atggagaacatgccagcactgagtccggtaggcatggtgactgtcattgatggggacaag
ggggagaatgcccgagtgcagctcacagtggagcaggacaacggtgactttgttatccag
aacgggacaggcaccatcctctccagcctgagctttgatcgggagcagcaaagcacctac
accttccagctgaaggcggtggatggcggcgtcccacctcgctcagcttacgttggcgtc
actatcaatgtgctggatgagaatgacaacgcgccctttatcaccgccccttccaacacc
tcccaccggctactgacccctcagacacgtcttggcgagacggtcagccaggtgacagct
gaggacattgactctggtatcaatgctgagctgacctatagcattgccggtggcaaccct
tacggactgttccagattgggtcacattcgggcgccatcaccctggagaaggagattgag
cggcgccaccatgggctgcaccgtctggtggtgaaggtcagtgaccgtggcaagccccca
cggtatggcacagccctggtccacctttatgtcaatgagaccctgtccaaccgcacgctg
ctagaaaccctgttgggccacagcctggatacgccactggacatcgacattgctggggat
ccagaatatgagcgctccaagcagcgcggcaacatcctctttggcgtggtggctggcgtg
gtggctgtggccttgctcatcgccctggcggtgctcgtgcgctactgccggcagcgggag
gccaagagtggctaccaggctggtaagaaggagaccaaggacctgtatgcccccaagccc
agcggcaaagcctccaagggaaacaaaagcaagggcaagaagagcaagtccccgaagcct
gtgaagccagtggaagatgaggacgaggctgggctgcagaagtccctcaagttcaacctg
atgagcgatgcccctggggacagcccccgcatccacctgcccctcaactacccaccaggc
agccctgacctgggccgccactaccgctctaactccccactgccttctatccagctgcag
ccccagtcaccctcagcatccaagaagcaccaagtggtgcaggacctgccgcctgcaaac
acattcgtgggcactggggacaccacgtccacaggctctgagcagtactccgactacagc
taccgcaccaatccccccaaataccccagcaagcagttacctcaccgccgagttaccttc
tccgccaccagccaggcccaggagctgcaggacccgtcccagcacagctactatgacagt
ggcctggaggagtctgagacgccatccagcaagtcatcctcagggccccgacttggtccc
ctggctcttcctgaggatcactatgagcgtaccacccctgatggcagcataggagagatg
gagcaccccgagaacgacctgcgccctttgcctgatgtcgcgatgacgggcacatgtacc
cgggagtgcagcgagtttggtcactccgacacgtgctggatgcctggccagtcgtctccc
agccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggaccga
ggagggcaggagcctgcgggcgccggcagccccagccccccggaagaccggaacaccaaa
acggcccctgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgattcc
tgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttcccaccc
gcagccacaccggcatctgcccagacggccaagcgcgagatctacctgtga
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