Miniopterus natalensis (Natal long-fingered bat): 107532467
Help
Entry
107532467 CDS
T05883
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107532467 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mna03021
]
107532467 (PCF11)
03019 Messenger RNA biogenesis [BR:
mna03019
]
107532467 (PCF11)
Transcription machinery [BR:
mna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107532467 (PCF11)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
107532467 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
CFIA_Pcf11
SHOCT
Motif
Other DBs
NCBI-GeneID:
107532467
NCBI-ProteinID:
XP_016062341
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MSEQTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSTPSKLHVSQIPPMAVKTPHQIPLQPEKSRPGPPLQIQDLKGTNRDPRLN
RMSQHSSHGKDQSHRKEFLMNTLNQSDIKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKFSHTKDLKNQESECPRVSDMSKRDPRLKKHLQDKTDSKDDDI
KEKRKTAEKKDKDEHMKSSEHRLVGSRNKIVNGIVQKQDTVTEESEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTAKAGKMRQSGCKQSHMEDFMPPSR
EERNAKRSTKQDVRDPRRIKKTEEERPQEIANQHSTKSGSEPKENVENWPSSKSNKRWKS
GWEENKSLQQGDDHSKSPHLRHRDSWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRSYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTRDGPTKMI
FEGPNKLSPRIDGPPAPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPAGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQPG
PQRFDGPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGARFDNHPSQRLESVSFNQT
GPYNDPPGSAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHYFDE
KNLQSSQFGNFGNLPAPITVGSIQASQQVLTGVAQPVPFGQGQQFLPVHPQNPGAFVQNP
SGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVAAQPSAEEEEDQNE
DQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNRT
EKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQS
VPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDCT
PSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEEQIDTPPACTEESIATPTEIKTENDT
VESV
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtaccgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcactcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaacgttggacgagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgagaatactagaaaaagtttatttaagttacgttcc
acatgggatgagatattcccattgaagaaactttatgccctggatgtcagagtcaattcg
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaagagccttcaactcctggcacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacccag
gaacaactaataaggcagcagttacttgcaaaacaaaaacagttattagaacttcagcag
aaaaagctggagcttgaactagagcaagctaaagcacaactggcagtttctcttagtgtt
cagcaggagacatccaacttaggtcctggatctacaccatccaaattacatgtttcacaa
attccccctatggcagttaaaactcctcatcagattcctttgcaacctgagaaaagccgt
ccaggtccacccttacaaattcaggacttgaaaggaacaaacagggatccccgccttaat
aggatgagtcaacattcttctcatggaaaagatcaaagtcacagaaaagaattcctaatg
aacacattaaaccagtctgatattaagacaagtaaaactataccctctgaaaaactaaat
tcatccaaacaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccag
ttagattctaaatctaaatctaaatctaaatcaccatcacctttgaaaaacaaattctcc
catacaaaagacttgaaaaatcaagaatctgaatgcccaagggtgtctgacatgagcaag
agagatccaagattaaaaaagcatcttcaagataagactgatagcaaagatgatgatata
aaagagaagagaaaaactgcagaaaagaaggataaagatgagcatatgaagtcatctgaa
cacagactggttggaagtcgaaataaaatcgttaatggcattgtacaaaaacaggataca
gtaacagaagaatcagaaaaacagggaacaaaaccagggagatcaagcactagaaagcga
tcaaggtcgcgatcacccaagtctcggtcaccaattatacattctcctaagagaagagat
aggcggtcacccaaacgaaggcaacggagtatgtctccaacctcgacagccaaagctgga
aagatgcgccaatctggatgtaagcagtcacatatggaagactttatgccaccatccagg
gaagaaagaaatgccaagagaagcactaaacaggatgttcgagatccaaggcgaataaag
aagactgaagaggaacgacctcaagaaattgcaaatcagcattctacaaagtcaggcagt
gaaccaaaggagaatgtagaaaattggccaagttccaagtctaacaaaagatggaaatct
ggttgggaagaaaataaaagcttacaacaaggcgatgaccatagtaaatctcctcatcta
aggcatagggacagctggtcaagcactaaaggaatcttgtcacctcgagccccaaagcag
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgcgatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgttcttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtacgagaagagcaaagatcaccattcaatgat
cgttttccacttaagcgacctcgatatgaagattcagataaaccatttgtagatagccca
gcatcacgattcgccggcctcgatacaaatcagcgacttacagcgttagctgaagacaga
ccattatttgatggacctagtaggccatcagtaacaagagatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctagaattgatggacctcctgcaccaggttctctt
cggtttgatgggtcacctggacaaatggggggaggtggccctttgagatttgaaggacca
caaggtcagctaggaggtgggtgtcctttgaggtttgaaggtcctccgggaccagtaggg
acacctctgcggtttgaggggccaattggtcaagcaggtggaggtggttttcggtttgaa
ggttcccctggtctgaggtttgaaggatctgcaggtggtctgcgatttgaaggaccaggg
ggccagcctgtgggtggtctcaggtttgagggacatcggggtcaaccagtgggtggtctg
aggtttgagggacctcatggtcagcctgtgggtggacttaggtttgataatccccgaggt
cagcctgtaggtggacttagatttgaggggggtcatgggccatcaggagctgcaattagg
tttgatggacctcatggtcagcctgcaggtggaatcagatttgagggccctttgctacag
cagggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtctgaggttt
gaaggacaacataatcaacttggtgggaaccttaggtttgagggtccacatggtcaacca
ggagttgggatcagatttgagggacctttagtccaacaaggaggtggaatgaggtttgag
ggtcctgtaccaggaggtggactgagaattgaagggcctctgggtcaaggtggtccaaga
tttgaaggttgtcatgctttaaggtttgatgggcagccaggccagccatcactcttacca
agatttgatggattacatggccaaccaggtcctagatttgaaagaactggtcagccaggc
ccacagagatttgatggacctggacagcaggttcagccaagatttgatggtgtgcctcaa
agatttgatggtccacaacaccagcaagcatcaagatttgatattcctcttggtcttcaa
ggcgcacgatttgacaatcatccttcacaaaggcttgaatcagtctctttcaatcagact
ggtccatataatgatccgcctggcagtgcttttaatgccccatcccaaggactgcagttc
caaagacatgaacaaatatttgattcacctcaaggaccaaattttaacggaccacatggc
cctggaaaccagagtttctcaaatccacttaacagagcttctggacactattttgatgaa
aagaatcttcagagttctcaatttggaaactttggcaatttacctgctccaataacagta
ggaagtattcaggcgtctcagcaggttctgactggtgttgctcagccagtgccgtttggc
cagggacaacaatttttaccagttcatccacaaaatcctggagcatttgttcagaatcct
tcaggagcccttcctaaggcatatcctgataatcatctcagtcaggtggatgtaaatgaa
ttattttcaaaactgctaaaaacaggaattctcaaattgtcccagcctgattcagctaca
acacaagtaaatgaagttgctgctcagccttccgctgaagaggaggaagaccaaaatgaa
gatcaagatgttccagatcttaccaattttacaattgaagaattgaaacaacgttatgat
agtgttataaatcgactgtacactggtattcagtgttactcttgtggaatgaggtttaca
acatcacagacagatgtatatgcagaccacttggactggcattatcggcaaaatagaact
gaaaaagatgttagcagaaaagtcactcatagacgttggtactacagtttaacagactgg
atagaatttgaggaaatagctgatctggaagaacgtgcaaagagccagttttttgaaaag
gtacatgaagaagttgtgctcaaaactcaggaagctgctaaagaaaaggagttccagagt
gtacctgcagggccagctggagcagttgagagttgtgaaatctgtcaagaacaatttgaa
caatactgggatgaagaagaggaagaatggcatttaaagaatgctattagagtggatgga
aagatttatcatccatcatgttatgaagattatcaaaacacatcgtcatttgattgtaca
ccatctcccagcaagacaccagttgaaaaccctttgaacattatgttgaacattgtcaaa
aatgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacaaattgatacccca
ccagcttgtacagaggaaagcatagcaacacccactgaaattaaaacagaaaatgataca
gtcgagtcagtttaa
DBGET
integrated database retrieval system
