Miniopterus natalensis (Natal long-fingered bat): 107534939
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Entry
107534939 CDS
T05883
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107534939 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mna04121
]
107534939 (TRIM54)
Ubiquitin system [BR:
mna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107534939 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
PHP
Sina_RING
DUF349
FlgN
MIF4G_like_2
UvrD_C
DUF1421
RHH_9
Zn_ribbon_FGT1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
107534939
NCBI-ProteinID:
XP_016065713
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MNFAVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLEALAREQE
QKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccagcacaacctgtgccgaaagtgtgccaatgacgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccaccactgtgtcttccggaggccggttccgctgcccgtcc
tgcaggcacgaggttgtcctggaccgacacggcgtctacggcctgcagcgcaacctgctg
gtggagaacattattgacatttacaagcaggagtcttcgcggccgctgcactccaaggcc
gagcagcacctcatgtgtgaggagcatgaggaggagaagatcaatatctactgcctgagc
tgtgaagtgcctacctgctctctctgcaaagtctttggtgcccacaaggactgcgaggtg
gccccgctgcccaccatttacaagcgccagaagagtgagctcagtgatggcatcgcgatg
ctggtggcgggcaatgaccgtgtgcaagccgtgatcacacagatggaggaggtgtgccag
accatcgaggacaacagccggaggcagaagcagttgctaaaccagaggttcgagacgctg
tgcgcggtgctggaggagcggaagggcgagctgctggaggccctggcccgggagcaggag
cagaagctgcagcgcgtcaggggcctcatccgccagtatggggaccacctggaggcctcc
tccaagctcgtggagtcggccatccagtccatggaggaaccgcagatggcgctctacctg
cagcaggccaaggagctgatcaataagtga
DBGET
integrated database retrieval system
