Miniopterus natalensis (Natal long-fingered bat): 107535724
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Entry
107535724 CDS
T05883
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107535724 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107535724 (PNLDC1)
Enzymes [BR:
mna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107535724 (PNLDC1)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107535724 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
107535724
NCBI-ProteinID:
XP_016066749
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MNEEQEKKIQHSILTGNWRVRSSLDKDQMKVVIDEVTRWLNLAEEGDWMTLPGIAGFQAF
EVQLVLRQALPDIWTVLGDQGVMVKKVSRQHRWYLQNTSCDRESRWREKILLSARGFSVF
FQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYNQFKLNIHSLFPVLIDTKNVTKDIW
KELNFPRVSNLSEVYEVLNSDLNPTKNSGPVIIHASECEKYVETKYPHEAAYDAFLCGSV
LLKVAHLLLWRVHGAGSIPEPSFPLYLDVLAPYVNQVNLIRAGVPKINFSGPDYPSIRPP
ILLLSVRRWPGVSEQQVYREFHSLCKFDVRRLTRNQFLLLTNKFKDARSILKEYRGHPTL
QVSLYRYWRHSPDINCLLQVCGVVTAWALAALLLGRPSP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagagcaggagaagaaaatccagcacagcatcctgaccgggaactggagagtc
cgcagttctctggataaagaccaaatgaaggtggtgattgatgaggtgacgcggtggctg
aacctggcagaggaaggcgactggatgactctccctggtatcgccggcttccaggccttc
gaggtgcagctggtcctgaggcaggccctccctgacatctggacggtgctgggcgaccaa
ggggtgatggtgaagaaggtgagcaggcagcatcgctggtaccttcagaacacctcctgc
gaccgagagagccgctggagggagaagattcttctctctgcgaggggcttctctgtgttt
ttccagatgctggtgaaagcccagaagcccttagtgggacacaatatgatgatggacctg
ctgcatctgcacgagaagttcttccgacctctcccagaaagctacaatcagtttaagctg
aatatccacagcctttttcctgtcctcattgacactaagaatgtgacgaaggacatatgg
aaggaactgaatttcccaagggtttcaaatctttccgaagtttatgaagtcctaaacagt
gacttgaatcccaccaagaattctgggccagtgattattcacgccagcgagtgtgagaaa
tacgtggagacaaagtacccccacgaagcagcctacgacgccttcctctgcggatcagtt
cttttgaaagtggctcacttgctcctgtggagagtgcacggagctggctccatacctgag
ccttccttccccctgtaccttgacgtgctggccccctacgtgaaccaggtgaatctgatc
cgagctggggtccctaagatcaacttttctggtccagattaccccagtatccgacccccc
atcctcctgctcagcgtcaggaggtggcctggggtcagcgagcagcaggtctaccgcgag
ttccacagtctctgcaaattcgatgtccggcgactcacgcgcaaccagttcctgctcttg
accaataagttcaaggacgctcggagcatcctgaaggagtacaggggccaccccaccctg
caggtctccctctatcggtactggaggcactccccggacatcaactgcttgttgcaagtc
tgcggcgtagttacggcctgggcgcttgccgcgctcctcctgggccggcctagcccctga
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