Miniopterus natalensis (Natal long-fingered bat): 107535904
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Entry
107535904 CDS
T05883
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03013
Nucleocytoplasmic transport
mna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107535904 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
107535904 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107535904 (THOC1)
03041 Spliceosome [BR:
mna03041
]
107535904 (THOC1)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107535904 (THOC1)
Spliceosome [BR:
mna03041
]
Complex C
Other components
EJC/TREX
107535904 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107535904 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
HsdM_N
Motif
Other DBs
NCBI-GeneID:
107535904
NCBI-ProteinID:
XP_016066988
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRAVRKRAAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSDTREYMPTLEEFFEEAIEQADPESMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEIFANKLGEQWKTLAPYLEMKESEIR
QIECDSEDMKMRARQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttacccgaagcgcggacgcggttcacgaagtct
accagagaggccctgaacaacaaaaatatcaagccattgttgaataccttcagccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcgtgtgaaaatgttttagctattatttcccttgctatt
gggggagtaactgaaggtatttgtaccgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacgatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattttattctgctgggaaaaattatttactacgtatgtgc
aatgatctcttaagaagattatcaaaatcccagaatacagtcttctgtgggcgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccctgggtcag
aagcacaccgaagatagagaggaaggaatggatgtcgaagaaggagaaatgggagatgat
gaagctccaacaacttgctccattccaatcgattacaacctgtatcgaaaattctggtca
cttcaggattatttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
ctcaagtattcagaagaagtactagctgttttcaagagttacaaattagatgatactcag
gcctcaagaaaaaagatggaagaattaaaaacaggaggagaacatgtgtattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagcgacagtaactttcgacgacat
atcctactgcaatatctcattttattccagtatctcaagggacaggtgaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagataccacaaaatcagtt
tatcaactactatctgaaaacccacctgatggagaaagattttcaaagatggtagagcat
atattaaatactgaagaaaactggaactcctggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacgtcagacaccaaaccaacaagagcagtacggaagagagcagcaccggag
gacttcctggggaaagggcccaacaaaaagattctgatgggaaatgaggagttaacaaga
ctttggaatctctgccctgataatatggaagcctgtaaatcagacacaagggaatatatg
ccaactttggaggaattctttgaagaagccattgaacaggcagaccctgaaagcatggtt
gaaaatgaatataaggctgtgaacaattccaattacggctggagagccctgagactcttg
gctcggagaagccctcacttcttccagccaaccaaccagcagttcaaaagtctgccagag
tatcttgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgttcggcgagacaaacctgtaacaggggaacaaatagagatatttgccaacaaa
ttgggtgaacaatggaagactctggctccctacttggaaatgaaagagtcggaaattaga
cagattgaatgtgacagtgaagacatgaaaatgagagctaggcagctactagttgcctgg
caagatcaagagggagtacatgcaacgcccgagaatctgattaatgcactgaataagtct
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
