Miniopterus natalensis (Natal long-fingered bat): 107538565
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Entry
107538565 CDS
T05883
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107538565 (PTBP1)
03041 Spliceosome [BR:
mna03041
]
107538565 (PTBP1)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107538565 (PTBP1)
Spliceosome [BR:
mna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107538565 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
107538565
NCBI-ProteinID:
XP_016070338
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MDGIVPDIAVGTKRGSDELFSACVTNGPFIMSSNSASAANGNDSKKFKGDNRSAGVPSRV
IHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYAEPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
GIMSASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGA
GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHL
NGHKLHGKPVRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
TLHLSNIPPSISEDDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNH
DLGENHHLRVSFSKSTI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcccagacatagcagttggtacaaagcggggatcggacgagctcttc
tctgcctgcgtcactaacgggccctttatcatgagcagcaattcagcctctgcagcgaat
ggaaatgacagcaagaagttcaaaggtgacaacagaagtgcaggtgtgccctctagagtg
atccacatccggaagcttcccagcgatgtcaccgagggcgaggtcatttccctgggactg
ccctttgggaaggtcaccaacctcctgatgctgaaagggaaaaaccaggccttcattgag
atgaacacagaggaggcagctaacaccatggtgaactactacacctctgtaacgcctgtg
cttcgtggccagccaatctacatccagttttccaaccataaggagcttaagactgacagc
tcacccaaccaggcaagggcccaggcagccttgcaggcggtgaactcggttcagtcgggg
aacctggcactcgctgcctcggctgctgctgtggatgctgggatggcgatggctggccag
agtccagtgcttaggatcattgtggagaacctcttctatccagtcaccctggacgtgctt
catcagatcttctccaagtttggcacagttctgaaaatcatcactttcaccaagaacaac
caattccaggcactgttgcagtatgccgaacccgtgagcgcccagcatgctaaactgtca
ctggatgggcagaatatctacaacgcttgctgcacactccgcatcgatttttctaagctc
accagcctcaatgtcaagtacaacaatgacaagagccgagactacacccgtcctgacctg
ccctctggtgatagccagccctcactggaccagactatggccgcagccttcggtgcacct
ggtataatgtcagcctctccgtatgcaggagctggtttccctcccacctttgccattcct
caagctgcaggcctctctgttcccaatgtgcatggggccttggcccctctggccatcccg
tcggcagcagcagcagcagcagcagctggccggatcgccatcccaggcctggcaggggct
ggaaattctgttctgctggtcagcaacctcaaccctgagagagtcacaccccaaagcctc
tttattcttttcggcgtgtatggcgatgtgcagcgggtgaagattttgttcaataagaag
gagaacgccctggtgcagatggcagatgggagccaggcccagctggccatgagccacctc
aacggtcataagctgcatggaaagccggtgcgcattacactctccaagcaccaaaatgtg
cagctgccccgtgagggccaggaggaccagggcctgaccaaagactatgggaactcacct
ctgcaccgcttcaagaagccaggctctaagaacttccagaacattttcccgccctcagcc
actctgcacctttccaacatcccgccttccatatccgaggatgatctcaagatcctcttc
tcgagcaatggcggaattgtcaaagggttcaagttcttccagaaggatcgaaagatggca
ctgatccagatgggttcagtggaggaggccatccaggcactcatcgacctgcacaaccac
gacctgggagagaatcaccacctgcgggtgtccttctccaagtccactatctag
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