Miniopterus natalensis (Natal long-fingered bat): 107538976
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Entry
107538976 CDS
T05883
Symbol
SKIV2L
Name
(RefSeq) helicase SKI2W isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107538976 (SKIV2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107538976 (SKIV2L)
Enzymes [BR:
mna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107538976 (SKIV2L)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107538976 (SKIV2L)
mRNA degradation factors
3'-5' decay
Ski complex
107538976 (SKIV2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
Helicase_C
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
107538976
NCBI-ProteinID:
XP_016070812
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MMETERLVLPPPGPLDLPLRAVELGCTGRWALLNEPGAPESTLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGLEHSTRKWQRKMDPWSLFAVLGAPVPSDLQAQRHPTTGQILGYKEVL
LENTDLSATTSLSLHRPPGPISQSLWGNPTQYPFWPGGMDEPTITEMSTQEEAEEEIDFE
KDLLTIPPGFKKGVDFAPKDHPAPAPGLLSLSRLLEPLDLGGGDDDEREAVGQPGGTRRD
TVSASPCSAPLARASSLEDLVLKEVSTVVSPSEPPKPLAQEQWAIPVDVTSPVGDFYRLI
PQPAFQWPFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTVYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VARPVPLEHYLFTGNSPKTQGELFLLLDSRGTFHTKGYYAAVEAKKDRMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMVDLHRMVTGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALDELTKKLVTLEEPDLTGQLVDLPEYYSWGEELTETRSLIQQRVIESVNGLKSLS
AGRVVVVQSREHHNALGVILQVSSNSTSRVFTTLVLCDKPMSEDPQERGSASPGVPYPDD
LVGFKLFLPEGPCDHTVAKLQPRDVAAITTKVFRVNGEKILEDFSKRQQLKFKSEMLGRP
LFLGRDHDPPSAAVTTVVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEE
LIRGAQCVHSPRFPAQYLKLRERMQVQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGY
VDEAGTVKLAGRVACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDTGEQL
PSTLKQGVDRVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVGVVYEWAQGMPFSELAG
LSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaccgagcgactcgtgctacctcccccaggccccctggacctgcctctccgg
gctgtggagctgggatgcactgggcgctgggcgctgctgaatgagcctggggctccagag
agcacccttccccatggcctccctccctgtgccccagatctgcagcaagaagccgagcag
ttgtttctgtcgtctccagcctggctgcctctgcatggtctggagcactcaacccgaaaa
tggcagaggaagatggatccctggtctctatttgctgtactgggggccccagtcccctcc
gacctgcaagcccaaagacatccaaccacaggccagatactgggctacaaggaggtcctg
ctggagaatacagacctgtcggccacaacctccttatctcttcacaggccaccagggccc
atctcccagtccctgtgggggaatccaacacagtaccctttctggccaggtggaatggat
gagcctaccataacagaaatgagcactcaggaggaagctgaggaagagatagactttgag
aaagatctccttactattccaccgggcttcaagaaaggtgtggactttgcaccaaaagat
cacccagctccagctcctgggttgctcagcctcagccgtctgctagagcccctggatctg
ggtgggggcgatgacgatgagagggaggcagtgggacagcctggaggtaccagaagggac
actgtttcagcctctccttgcagtgctcccttggcccgagcaagcagcttggaagacctg
gtgctgaaggaagtgtccacagttgtatccccctcagagccccccaaacctcttgctcag
gagcagtgggccattccagtggatgtcacttcccctgtcggtgatttctaccgcctcatt
ccccagccagccttccagtggccatttgagcctgatgtgttccagaaacaagctatcctg
cacttggaacggcatgactcagtctttgtggcggctcacacatctgcagggaagacagtt
gtggctgaatatgccattgcccttgcccagaagcacatgacgcgcactgtctatacttcg
cctatcaaggctctgagtaaccagaagttccgagacttccgaaatacatttggggatgtg
gggctgctcactggggatgtacagctgcacccagaggcctcctgcctcatcatgacgaca
gagatccttcgctccatgctgtacagtggctcagatgtcatccgggacctggagtgggtc
atctttgatgaggttcactacatcaacgatgctgagcgtggggtcgtgtgggaggaggtg
ctcatcatgctccctgaccatgtctccatcatccttctgagtgccactgtacccaacgcc
cttgagtttgctgactggattggacgactgaagcgtcgccagatctacgtgatcagcacc
gtcgctcgccctgtgcccctggagcattacctcttcacggggaacagccccaagacccag
ggtgaactcttcctgttgctggactcccgaggcaccttccacacaaaggggtactatgcg
gctgtggaggctaagaaggacaggatgagcaaacacgcccagacctttggggccaagcag
cccacgcatcaggggggacccgcacaggaccgtggtgtgtacctgtccctcctggcctcc
ctccgcacccgtgcacagctgcccgtggtggtgttcaccttctcccggggccgctgtgac
gagcaggcttcaggcctcacctccctggacctcaccacgagttcagagaagagtgagatt
cacctttttctgcagcgctgccttgctcgcctccgcggctctgaccgccagctgccgcag
gtcctgcacatgtcagagctcctgcaccgaggcctgggcgtgcaccacagtggcatcctg
cccatcctcaaggagatcgtggagatgctcttcagccgcggtctggtcaaggtcttgttt
gccacagagacctttgccatgggtgtgaacatgcctgcccgaacagtggtgtttgactcc
atgcgaaagcatgatggctccaccttccgggacctgctccctggggagtacgtgcagatg
gcgggccgggcaggccggaggggcctggaccccacaggcaccgtcatcctgctctgcaag
ggccgcgtgcctgagatggtggacctgcaccgcatggtgacgggtaagccatcgcagctg
cagtctcagttccgcctcacatacaccatgatcctcaacctgctgcgggtggacgccctc
agggtggaggacatgatgaagaggagcttctctgagtttccatcccgcaaggacagcaag
gcccatgaacaggctctggacgaattaaccaagaagctggtgaccttggaggagcctgac
ctgactggccaactggtggacctgcccgagtattacagctggggagaggaactgacagag
acccggagcctgatccagcaacgtgtcatagagtctgtgaatgggctgaagtctctctca
gccggaagggtggtggtcgtgcagagtcgggagcatcataatgcactgggtgtgatcctg
caggtctcctcaaactctaccagcagagtattcacaactctggtcttgtgtgataaaccc
atgtctgaggacccacaggagaggggttcggcctccccaggtgtgccctacccagatgac
cttgtgggattcaagctgttcctgcctgaagggccctgtgaccacactgtggccaagctc
cagcccagagacgtggctgccatcaccaccaaagtgttccgggtgaatggggagaagatc
ttggaggatttcagcaagaggcagcaactgaaattcaagtcagagatgctggggaggccc
cttttcctggggagggaccatgatcctcccagtgctgctgtgaccactgttgtccaggaa
ttgctgcgcctggctcaggcccacccagcaggaccccctacccttgaccctgtcaacgac
ttgcagctcaaggatgtgtcagtggttgaggggggactccgggcccggaagctagaggag
ctgattcggggggctcaatgtgtgcacagcccccgtttccctgcccagtacctgaagctg
cgggaacgaatgcaggtacagaaggaaatggagcggctgcgcttcctgctatcagaccag
tcattactgctgctccctgagtaccaccagcgagtagaggtgctccgaactctgggttat
gtagacgaggcaggcacagtgaagctggcggggcgggtggcttgtgctatgagcagccac
gagctgctcctcactgagctcatgttcgacaacgctctgagtgcccttcggccagaggag
attgcggctctgctctctggcctggtctgccagagccccggggacactggggagcagctc
ccaagtaccctcaaacagggagtggaccgtgtccgtgctgtggccaagcggattggtgag
gtccaggtggcttgtggcctgaaccagacagtggaggaatttgtaggggagctgaatttc
gggctggtcggagttgtgtacgagtgggcccagggcatgcccttctccgagttggcaggg
ctctctgggacccccgagggcctggtggtccgctgcatccagcgcctggccgaaatgtgt
cgctcattgcgaggggcggcccgcctggtaggcgagcctgtgctaggtgctaagatggag
acagcagctaccctgctgcggagggacatagtctttgcagctagcctgtacactcagtga
DBGET
integrated database retrieval system
