Miniopterus natalensis (Natal long-fingered bat): 107539963
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Entry
107539963 CDS
T05883
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03082
ATP-dependent chromatin remodeling
mna04714
Thermogenesis
mna05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107539963 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
107539963 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
107539963 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mna03000
]
107539963 (ARID1A)
03021 Transcription machinery [BR:
mna03021
]
107539963 (ARID1A)
03036 Chromosome and associated proteins [BR:
mna03036
]
107539963 (ARID1A)
Transcription factors [BR:
mna03000
]
Eukaryotic type
Helix-turn-helix
ARID
107539963 (ARID1A)
Transcription machinery [BR:
mna03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107539963 (ARID1A)
Chromosome and associated proteins [BR:
mna03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107539963 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
107539963
NCBI-ProteinID:
XP_016072069
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSTMG
GLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQ
PQSQPPQLQSTQPPYSQQPSQPPHQQSPTPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQ
QPQQPASSTISQQAAYPQSQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSTPSMTSSKG
GQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSP
HTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPAGNQMPPRPPSGQSDSIMHPSMN
QSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQMHTGMGSYQQNSMGSYGPQGSQ
YGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMHGQPGIPPYGTLPPGRMSHAS
MGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGG
IMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGMAASPEMMGLGDVKLTPATKMN
NKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLP
AVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYA
FECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKP
PTPASTPHSQIPPLPGMRSNSVGIQDAFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGR
MSYEPNKDPYGSMRKAPGSDPFMSSGQGPNSGMGDPYSRAAGPGLANVAMGPRQHYPYGG
PYDRVRTEPAIGPEGNMGSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQRHDSYGNQF
STQGNPSGSPFPSQQTTMYQQQQQNYKRPMDSTYGPTAKRHEGEMYSVPYSTGQGQPQQQ
QLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAAAATERRPASGPQNQFPFQFGRDR
VSAPPGSSAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYANRQSTGSAPQGPAY
HGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQNHIP
QVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPMIRRDITFPP
GSVEATQPILKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMT
FNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGRFSKVSSPAPVEEEE
EEEEEEEDLLDPKLEDKEEEEVVENDEEMAFSGKDKAASENSEEKLISKFDKLPVKIVQK
NDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLPTRPHVPRLPVTR
KHVTAAEGTSGTTEQKGAPPDGPPEKRITATMDDMLSTRSSTLTEEGAKSAEATKESSKF
PFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDF
EMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLREN
TLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVL
ETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDS
LAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALL
ALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatgggcaagatgagacctcagccatatggtggaactaacccatactcgcaa
caacagggacctccatcaggaccacagcaaggacatgggtacccagggcagccatatgga
tcccagaccccgcagcggtacccgatgaccatgcagggccgggcgcagagtaccatgggc
ggcctctcttatgcacagcagattcctccttatgggcaacaaggccccagcggatatggt
cagcagggccagactccatattacaaccagcaaagtcctcacccccagcaacagcagcca
ccctactcccagcaaccaccatcccagactcctcatgcccaaccttcatatcaacagcag
ccgcagtctcagccaccacagctccagtccacccagcctccatattcccagcagccatcc
cagcctccgcatcagcagtctccaactccatacccctcccaacagtcaacaacccagcag
cacccccagagccagcccccctactcacagccgcaggcacagtctccctaccagcagcag
caacctcagcagccagcatcctcgaccatctcccagcaggctgcgtaccctcagtcccag
tctcagcagtcacagcaaactgcctattcccagcagcgcttccctccaccacaggaatta
tcgcaagattcatttgggtctcaggcatcctcaaccccctcaatgacctccagtaaggga
gggcaagaagatatgaacctgagtcttcagtcaagaccctcaagcttgcctgatctgtct
ggttcaatagacgatctccccatggggacagaaggagctctgagccctggagtgagcaca
tcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttttctcct
catacctctcctcacctgcctggcatccgaggcccttccccgtcccctgttggctctccc
gccagtgttgctcagtctcgctcaggaccactctcacctgctgcagtgccagcaggcaac
cagatgccacctcggccacccagtggccagtcggacagcatcatgcatccttccatgaat
caatcaagcattgcccaagatcgaggttacatgcagaggaacccccagatgccccagtac
agttccccccagcccggctcggccttatctccacgtcagccttctggaggacagatgcac
acaggcatgggctcctaccagcagaactccatggggagctatggtccccaggggagtcag
tatggcccacagggaggctaccccaggcagccaaactacaatgccttgcccaatgctaac
taccccagtgcaggcatggccggaagcatgaaccctatgggtgctggaggtcagatgcat
gggcagcctggcatcccaccttatggcacactccctccagggagaatgagtcatgcctcc
atgggcaaccggccttatggccctaacatggccaatatgccgcctcaggttgggtcaggg
atgtgtcccccaccagggggcatgaaccggaaaactcaagaaactgctgtcgccatgcat
gttgctgccaactctatccaaaacaggccaccaggctaccccaatatgaatcaagggggc
ataatgggaactggacctccctatggacaagggattaatagtatggctggcatgatcaac
cctcagggacccccatatccaatgggtggaaccatggccaacaattcagcagggatggca
gccagcccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatgaac
aacaaggctgatgggacacccaaaacagaatccaaatccaaaaaatccagttcttctact
acaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaagatg
tgggtggaccgttacctggccttcacagaggagaaggcaatgggcatgacaaatctgcct
gctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagattggt
ggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgaccaacctcaatgtc
ggcacctcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctctatgcc
tttgagtgcaagattgaacggggagaagaccctcccccagacatcttcgcagctgctgat
tccaagaagtcccagcccaagatccagcctccttctccagctggatcagggtctatgcag
gggccacagacacctcagtcaaccagcagttccatggcagaagggggagacctgaagcca
ccaactccagcatccacaccacatagtcagataccccccttgccaggcatgagaagcaat
tcagtcgggatccaggatgcatttcctgatggaagtgaccccacattccagaaacggaat
tccatgactccaaaccctgggtaccagcccagtatgaatacctctgacatgatggggcgt
atgtcctacgagccaaataaggatccttatggcagcatgaggaaagctccagggagtgat
cccttcatgtcctcagggcagggccccaacagcgggatgggggacccctacagccgagct
gccggccctgggctggcaaatgtggcaatgggaccacgacagcactatccttatggaggt
ccttatgacagagtgaggactgagcctgcaataggacccgagggaaacatggggagcact
ggagccccacagccgaatctcatgccttccaacccagactcggggatgtattctcctagt
cgctacccccctcagcagcagcaacagcagcaacgacatgattcctatggcaatcagttc
tccactcaaggcaacccttccggcagccccttccccagccagcagaccacaatgtatcag
caacagcagcagaattacaagcggccgatggatagcacatatggccctactgccaagcgg
cacgaaggggaaatgtacagtgtgccatacagcacggggcaggggcagccccagcagcag
cagttgcccccagcccagccccagcctgccagccaacaacaagctgcccagccttcccca
cagcaagatgtgtacaaccagtatggcaacgcgtatcctgccactgccgccgctgctact
gagcgccgaccagcaagtggcccccagaaccagtttccattccagtttggccgagaccgt
gtctcagcaccccctggctccagtgcccagcagaacatgccaccacaaatgatgggtggc
cccatacaggcatccgctgaggttgctcagcaaggcaccatgtggcaagggcgtaatgac
atgacctacaattacgccaacaggcagagcacaggctctgccccccagggccccgcctat
catggtgtgaaccgaacagatgaaatgctgcatacggatcagagggccaaccatgaaggc
tcatggccttcccatggcacacgccagcccccatatggtccctctgcccccgtacccccc
atgacaaggccccctccttccaactaccagcccccaccaagcatgcagaatcacattcct
caggtatccagccctgctcccctgccccggccaatggagaaccgcacctctcctagcaag
tctccattcctgcactctgggatgaagatgcaaaaggcagggccccccgtacctgcctct
cacatagcacctgcccctgtgcagccccccatgattcggcgggacatcaccttcccacct
ggctctgttgaagccacacagcctattttgaagcagaggaggcgactcaccatgaaagac
atcggaactccggaggcatggcgggtaatgatgtccctcaagtctgggctgctggcagag
agcacatgggcattagacaccattaacatcctgctgtatgatgacaatagcatcatgacc
ttcaacctcagtcagctcccagggttgctagagctccttgtggaatatttccgacgttgc
ctgatcgagatctttggaattttaaaggagtatgaggtgggtgacccagggcagagaaca
ctactggaccctgggagattcagcaaggtgtctagtccagcccctgtggaggaggaagag
gaggaggaggaagaggaggaagaccttctagatcctaaactagaggacaaagaagaggag
gaagtagttgaaaatgatgaggagatggccttttcaggaaaggacaaggcagcctcagag
aatagtgaggagaaacttattagtaagtttgacaagcttccagtaaagatcgtacagaag
aatgacccgtttgtggtggactgctcagataagcttgggcgtgtgcaggagtttgacagt
ggcctgctgcactggcggattggtgggggggacaccactgagcatattcagacccacttt
gagagcaagacagagctgctgcctacccggcctcatgtgccccgcctaccagtcacccgg
aaacatgtcacagcagcagagggtacatcagggacaacagaacagaagggtgccccacct
gatggccctccagaaaaacggatcacagctactatggatgatatgttgtccacacggtct
agtacattgactgaggagggagctaagagtgcagaggctaccaaggagagcagcaagttt
ccatttggcatcagcccagcacagagccaccggaacatcaagatcctagaggatgaaccc
cacagtaaagatgagaccccactgtgtacccttctggactggcaggattcccttgccaag
cgctgcgtctgtgtctccaataccatccgaagcctgtcatttgtgccaggtaacgacttt
gagatgtccaaacacccagggctgctgctgatcctcggcaagctgatccttctacaccat
aagcatccagaacggaagcaggcaccactgacttatgagaaggaggaggagcaggaccaa
ggggtgagctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaac
accctggtcacgctagccaacatctcggggcagttggacctctccccgtaccccgagagc
atttgcctgcctgtcctggatggactcctacattgggcagtctgcccttcagctgaagcc
caggaccccttctccaccctgggccccaacgccgtcctctcccctcagagactggtcttg
gaaaccctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccacgccc
cccttcagccgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaag
aacccggtctgccgggagatggctgtggtactgctggccaacctggcacagggagacagc
ctggcagcccgtgccatcgcagtgcagaagggcagcatcggcaacctcctgggcttcctg
gaggatagccttgctgccacacagttccaacagagccaggctagcctgctccacatgcag
aacccgccctttgagccaactagtgtggacatgatgcggcgggctgcccgtgcactgctg
gccctggccaaggtggacgagaaccactcagagttcacattgtatgagtcacggctgttg
gacatctcagtatcaccattgatgaactcattggtttcacaagtcatttgtgatgtactg
tttttgattggccagtcatga
DBGET
integrated database retrieval system
