Miniopterus natalensis (Natal long-fingered bat): 107540641
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Entry
107540641 CDS
T05883
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107540641 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107540641 (XAB2)
03041 Spliceosome [BR:
mna03041
]
107540641 (XAB2)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107540641 (XAB2)
Spliceosome [BR:
mna03041
]
Complex B
Other components
Prp19-related factors
107540641 (XAB2)
Complex C
107540641 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_12
TPR_2
TPR_8
TPR_19
Suf
TPR_15
TPR_7
TPR_1
TPR_16
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
107540641
NCBI-ProteinID:
XP_016072922
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
VDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATQAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAEQDQPPRAQSKILFVRSDASREELAQLAQQANPEEIELGEDDDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtaatggcgcgactctcgcggcaggagaggccggaccttgtctttgatgaagaa
gacctcccctatgaggaggaaattatgcggaaccagttctccgtcaaatgctggcttcgc
tacattgagttcaaacagggggccccgaagccgaggctcaatcagctgtatgagcgagcg
ctgaagctgctgccctgcagctacaaactctggtaccgctacctgaaggcacgccgggca
caagtgaagcatcgctgtgtgactgatcctgcctatgaagatgtcaacaactgccacgag
agggcctttgtattcatgcacaagatgccacgtctgtggctagattattgtcagttcttg
gtggaccagggccgtatcactcacacccgccgcactttcgaccgggccctccgggctctg
cccatcacacagcactctcgtatttggcctctttacctgcgtttcctgcgctcacaccca
ctgcctgagacggccgtgcggggctaccggcgcttcctcaagctaagccctgagagcgca
gaggagtacatcgagtacctaaagtcaagtgaccggctggatgaggctgcacagcgcctg
gccaccgtggtgaatgacgagcgcttcgtgtccaaggctggcaaatccaactaccagctg
tggcatgagctctgtgacctcatctcccagaatccggacaaggtgcagtcgctcaacgtg
gacgctatcatccgagggggccttacccgcttcactgatcagctgggcaagctctggtgc
tcgctggctgactactacatccgcagtggccactttgagaaggctcgggatgtgtacgag
gaggccatccggaccgtgatgactgtgcgggacttcacccaggtgtttgacagctatgcc
cagtttgaggagagcatgattgcagctaagatggagaccacctcagagctggggcgggaa
gaagaggatgacgtggacttggaactacgcctggctcgctttgagcagctgatcagccgg
cggcccctgctccttaacagcgtcttgctgcgccagaacccgcaccatgtacatgaatgg
cacaaacgtgtggccctgcaccagggtcgcccccgggagatcatcaacacatacacagag
gccgtgcagacagtggaccccttcaaggctacaggcaagccgcacacgttgtgggttgca
tttgccaaattttatgaggacaacgggcagctggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaggtggatgacctggcaagtgtgtggtgtgagtgtggt
gaactggagcttcggcacgagaattatgaccaggccttgcggctgctgcggaaggcaaca
gcactgcctgcccgcagggctgaatatttcgacggctcagagcccgtgcagaaccgagta
tacaaatcactgaaggtgtggtccatgcttgccgacctggaggagagccttggcaccttt
cagtctaccaaggccgtgtatgaccgtattctggacctgcgcattgctaccccccagatc
gtcatcaactatgccatgttcctagaggagcacaagtacttcgaggagagctttaaggcg
tacgagcgtggtatctcgctgttcaagtggcccaatgtgtctgacatctggagcacctat
ttgaccaaattcatcgcccgctatgggggccgcaagctagagcgggcacgagacctcttt
gagcaggcactggatggctgcccccccaaatatgcaaagaccctgtacctgctgtacgca
cagctggaggaggagtggggcctggcccggcatgctatggccgtgtacgagcgtgccacc
caggctgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgggcagcg
gagatctatggagtcacccacacccgtggcatctaccagaaggccatcgaggtgctgtcg
gacgaacacgcccgggagatgtgcctgcggtttgcagacatggagtgcaagcttggagag
attgaccgcgcccgggccatctatagcttctgctcccagatctgtgacccccggacgact
ggcgccttctggcaaacatggaaggacttcgaggtacggcatggcaatgaggacaccatc
cgggagatgctgcgtatccgccgaagcgtgcaggccacttacaacacacaggtcaacttc
atggcctctcagatgctcaaggtgtcgggcagtgccacgggcactgtgtctgaccttgcc
cctgggcagagtggcatggatgacatgaagctgctagagcagcgggcagagcagctggca
gccgaggccgagcaggaccagcccccacgggcccagagcaagatcctgtttgtgaggagt
gacgcgtctcgggaggagctggcccagctggcgcagcaggccaacccggaggagatcgag
ctgggcgaggacgacgacgaggacgagatggacctggagcccaacgaggtgcggctggag
cagcagagcgtgccggctgccgtgtttgggagcctgaaggaagactga
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