Miniopterus natalensis (Natal long-fingered bat): 107541731
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Entry
107541731 CDS
T05883
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03015
mRNA surveillance pathway
mna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107541731 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
107541731 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107541731 (PABPC4)
03041 Spliceosome [BR:
mna03041
]
107541731 (PABPC4)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107541731 (PABPC4)
mRNA cycle factors
Stress granule specific factors
107541731 (PABPC4)
Spliceosome [BR:
mna03041
]
Complex C
Other components
Complex C specific factors
107541731 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
107541731
NCBI-ProteinID:
XP_016074377
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIPPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgccgccagcagctaccccatggcctccctgtacgtgggtgacctgcactcg
gacgtcaccgaggccatgctgtacgaaaagttcagccctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggttatgcctacgtcaacttccag
cagccagctgacgctgagcgggccttggatactatgaactttgatgtgattaagggaaag
ccaatccgcatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaat
gtcttcatcaagaacctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggaaatattctgtcctgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgttcacttcgagacccaagaggctgcagacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgttcgtgggcagattcaagtctcgaaaagagcgggaa
gccgagcttggagccaaagccaaggagttcaccaatgtgtatatcaaaaactttggggaa
gaggtggatgacgagagtctgaaagagctgtttagccagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaaa
catgaggatgccaataaggctgtggaggagatgaatggaaaagaaatcagtgggaaagtc
atttttgtaggccgtgcacagaagaaagtggaacggcaggctgagttaaaacggaaattt
gaacagctgaaacaagaaagaattagtcgataccagggggtgaatctctacattaagaac
ttggatgacaccattgacgatgagaagttaaggaaagagttttctcctttcggatccatc
accagtgctaaggtaatgctggaggatggaagaagcaaagggtttggctttgtctgcttc
tcatctcctgaagaggcaaccaaagcagtcactgagatgaacggacgcatcgtgggctcc
aagccactatatgttgccctggcccagaggaaggaagagcgaaaggctcacctaaccaac
cagtatatgcagcgggtggccggaatgagagcactccctgccaatgccatcttaaatcaa
ttccagcctgcagctggtggctactttgtaccagcagttccacaggctcagggaagacct
ccatattacacacctaatcagttagcacagatgagacctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtcca
actcttcgccatctggctccaactggtaatgctccggcctctcgtggcctccctactact
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggtgttcctacagctgtgcag
aacttagcacctcgtgctgctgtggcggctgctgctcctcgggctgttgcaccttacaag
tatgcctccagtgtccgcagccctcaccctgccataccacctctgcaggcaccccagcct
gcggtccatgtgcaggggcaggagcccctgactgcctccatgctggctgcagcacccccc
caggaacagaagcagatgctgggagagcgtttgttcccactcatccaaaccatgcattcg
aacctggctggaaagattacaggaatgcttctagagattgacaactccgagctactgcac
atgctggagtcccccgagtctctccgctccaaggtggatgaagctgtggcagttctacag
gctcatcatgccaagaaagaagctgcccagaaggtgggcgctgttgctgctgctacctct
tag
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