Miniopterus natalensis (Natal long-fingered bat): 107542376
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Entry
107542376 CDS
T05883
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107542376 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mna03041
]
107542376 (SF3B1)
03036 Chromosome and associated proteins [BR:
mna03036
]
107542376 (SF3B1)
Spliceosome [BR:
mna03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
107542376 (SF3B1)
Complex B
107542376 (SF3B1)
Complex C
U2 SnRNP specific factors
107542376 (SF3B1)
Chromosome and associated proteins [BR:
mna03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107542376 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
HEAT_EZ
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
TALPID3
Motif
Other DBs
NCBI-GeneID:
107542376
NCBI-ProteinID:
XP_016075205
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagcgcaaggagtgggccttgattctacaggctattatgac
caggaaatatatggtggaagtgacagcagatttgctggatacgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccaggatatcatgcccctgtggcattgctcaatgatataccacagtcaacagaacag
tatgatccatttgctgagcaccggcctccgaagattgccgaccgggaagatgaatacaaa
aagcacaggcggaccatgataatttccccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctagaacttacatggatgtaatgcgagagcagcat
ttgactaaagaagagagagaaattaggcaacaactagcagaaaaagctaaagctggagaa
ctaaaagttgtcaatggagcagcagcatcccagcctccctcaaaacgaaaacgacgttgg
gatcaaacagctgatcagactcctggtgccactcccaaaaagctatcaagttgggatcaa
gcagagacccctggacataccccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacaccaagtcac
acaccagcgggagctgccactcctggacgaggtgatacaccaggccatgcaacaccaggc
catggaggcgcaacttccagtgcacgtaaaaacagatgggatgagacccccaaaacagaa
agagatactcctgggcatggaagtggatgggctgagacccctcgaacagatagaggtgga
gattcaattggcgaaacacccactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagtcagatgggtggaagtactcctgttctgacccctggaaaaacacctatt
ggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcgttgggagagagaaattgatgaaagaaatcgcccactttct
gatgaagaattagatgctatgttcccagaaggatataaggtacttcctcctccagctggt
tatgttcctattcgaactccagctcgaaagctgacagcaactccaacacctttgggaggt
atgactggtttccatatgcaaactgaagatagaactatgaaaagtgttaatgaccaacca
tctggaaatcttccatttttaaaacctgatgatattcagtactttgataaacttttggtt
gatgttgatgaatcaactcttagtccagaagagcaaaaagagaggaaaataatgaaattg
cttttaaaaattaagaatggaacacctccaatgagaaaggctgcactgcgtcagattact
gataaagctcgagaatttggagcaggtcctttgtttaatcagattcttcctctactgatg
tctcctacacttgaggatcaagaacgtcatttacttgtcaaagttattgatagaatatta
tacaaacttgatgacttagttcgaccatatgtgcataagatccttgtggtcattgaacca
ttgttgattgatgaagattactatgctagagtggaaggccgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgagacccgatatagataacatg
gatgaatatgttcgtaacacaacagctagagcttttgctgttgtagcttctgccctgggt
attccttcactattgccctttttaaaggctgtgtgcaaaagcaagaagtcctggcaagct
agacacactggcattaagattgtacagcagatagctattcttatgggctgtgccatcttg
ccacatctgagaagtttagttgaaatcattgaacacggtcttgtggatgagcagcagaaa
gttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccttatggt
atcgaatcttttgattctgtattaaagcctctatggaagggtatccgacaacacagagga
aagggtctggctgccttcttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattcgagaattccagtctcct
gatgaagaaatgaagaaaattgtgctgaaggtggtaaaacagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagattctgccgcctttttttaaacacttctggcaa
cacagaatggctttagatagaagaaattatcgacagttagttgatactactgtggagttg
gcaaacaaagtaggtgcagcagaaattatatccaggattgtggatgatctgaaagacgaa
gctgaacagtacagaaaaatggtgatggaaacaatcgagaaaattatgggcaacttggga
gcagcagatattgatcataaacttgaagaacaactgattgatggtattctttatgctttc
caagaacagactacagaggactctgtaatgctgaatgggtttggcacagtggtcaatgct
cttggcaaacgggttaaaccttacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatcagcaaaagttaggcaacaggcagctgacttgatctctcgaactgcggtt
gttatgaagacttgtcaagaggaaaaattgatggggcacttgggtgttgttttgtatgag
tatttgggtgaagagtaccctgaagtattgggcagcattcttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctgctgcctagactc
actcccatcttaaagaacaggcatgaaaaagtacaagagaattgtattgatcttgttgga
cgtattgctgacaggggagctgaatatgtgtcagcaagggaatggatgaggatctgcttt
gagcttttggagctcttaaaagctcacaaaaaagctattcgtagggccacagtcaacaca
tttggttatattgcaaaggctattggccctcatgatgtattggctacacttttaaacaac
ctaaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgttgct
gaaacgtgttcacccttcacagtactacctgccttaatgaatgaatacagagttcctgaa
ctgaatgttcaaaatggagtgttaaaatcactttccttcttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccattacttgaagatgctttaatggacagg
gaccttgtacacaggcagacggctagtgcagtggtgcaacacatgtcacttggggtttat
ggatttggttgtgaagactcactgaaccacttgttgaactatgtatggcccaatgtgttt
gagacatctcctcatgtaattcaggcagttatgggagccctggagggcttgagagttgct
attggaccatgtagaatgttgcagtattgtttacagggtttgtttcacccagcccggaag
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaactt
gactatatcttataa
DBGET
integrated database retrieval system
