Miniopterus natalensis (Natal long-fingered bat): 107542618
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Entry
107542618 CDS
T05883
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mna03009
]
107542618 (PDCD11)
Ribosome biogenesis [BR:
mna03009
]
Eukaryotic type
90S particles
Other 90S particles
107542618 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
OB_RRP5_4th
OB_RRP5
HAT_Syf1_CNRKL1_C
Suf
TPR_14
TPR_19
TPR_CcmH_CycH
ARM_TT21
TPR_15
TPR_16
ARM_TT21_5th
TPR_12
TPR_6
UTP6_C
DUF7017
DUF2110
Motif
Other DBs
NCBI-GeneID:
107542618
NCBI-ProteinID:
XP_016075498
LinkDB
All DBs
Position
Unknown
AA seq
1875 aa
AA seq
DB search
MATMEESFPRGGTRKTHKSEKAFQQSVEQDNLFDISTEEESTKRKKSQKGPAKTKKLKIE
KRESSKSVKEKFEILSIESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLNEQVAQGEPLKDLASLPELFSPGMLVRCVVSSLGNTEKGKKSVQLSLNPQNVNKVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVGGARAFLPLQKAQEYIRQKNKGAKLKVGQYLN
CFIEEVKGNGGVVSLSIGHSEVSTAIATEEQHWTLNNLLPGLVVKAQVQKVTPFGLRLNF
LTFFTGLVDFMHLEPKKAGTYFSNQAVRACVLCVHPRTRAVRLSLRPIFLQPGRPLTRLS
CQHLGAVLDDIPVQGFFSKAGATFRLKDGSLAYARLSHLSDSKNTFKPEAFKPGNTHKCR
IISYSQMDELALLSLRTSVIEAPYLGYHDIKPGTLVKGTVLTIKPYGMLVKVSEQIRGLV
PPMHLADILIKNPEKKYHIGDEVTCRVLLCDPDAKKLMMTLKKTLVESKLPAITCYADAK
PGLQTHGFILRAKDFGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYTGQVVKVAVLNCE
PSKERMLLSFKLLSDPNKEHVEHSKKKRKSVNVGQLVDVKVLEKTKDGLEVAVLPHNIPA
FLPTSHLSDHVANGPLLYHWLQAGDTLHRVLCLSQSERHVLLCRKPALVSTVEGGQDPKS
FSEIHPGMLLMGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAK
VTNVDEEKQRMLLSLRLSDCTLGDLATTSLLLLNQCLEERQGVRSLMSNRDSVLIQTLAE
MTPGMILDLEVQEVLEDGSVVFSEGPVPGLVLRASKYHRAGQEVESGQKKKVVILNIDML
KLEVHVSLCHDLVNRKAKKLKKGSEHQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDT
FRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPATKRTMRQTRKDSETVDEDDEGDSA
VIVGTVRKHTLSIGDMVTGTVKSIKPTHVVVTLENGIIGCIHASHILDDVPVGTSPTAKL
KVGKKVTARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELEKDGHTALNTHSVSPLE
KIKQYQAGQTVTCFLKKYNVIKKWLEVEIAPDVRGRIPMLLISLSFKVLKHPDKKFQIGQ
ALKATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPKKGLTVSFPFGRVGRVSVF
HLSDSYSEAPLEAFTPQKIVRCYVLSTEGDVLTLSLRSSRTNPETKSKVPDPEINSTQDI
REGQLLRGYVKSAQPHGVFLGLGPSVVGLAQYPHVSQNSPSEKALYDRYLPEGKLLTAKV
LSVNHQKNLVELSFLPSDTGKPDVFPTPLGLPVLNKGERQIEAEERHHVEEEKEKEKNQK
RKEKRKQKGQEEAQLPGKEKKEPQKPQAEKQGKRPHLESAREQERANKKQKKAAPAEEDD
SGVEVYYREGEEEIEETGALPKERQTRPADVPRLQLSSGFVWDVGLESLTPALPPRGESS
DSEEDDKPQQATQKKKSKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSP
NSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQES
LTKVFERAVQYNEPLKVFLQLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLL
RRGQAGASHRAMQRALECLPKKEHVDVLSKFAQLEFQLGDAERAKAIFENTLSTYPKRTD
VWSVYIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKA
KALEYVEAKSSVLED
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatggaagaaagtttcccccgtgggggtacaagaaagacccacaaatccgag
aaagctttccagcagtcagttgaacaagacaacttatttgatatttctactgaagaggaa
tccaccaaaaggaaaaagagccagaaagggccagcaaaaacaaaaaagttgaaaatcgaa
aagagagaaagcagcaagtctgtaaaagagaagtttgaaatccttagtattgagtccctg
tgtgaggggatgcggattttgggttgtgtgaaagaggtaaatgaactggaactggtgatt
agtctccccaatggcctccaggggtttgtgcaagtaactgaaatctgtgatgcttacacc
aaaaagctgaatgagcaggtggcacaaggagaacctctgaaggacctggccagcttgcct
gaactcttctctcctgggatgctggtgagatgtgtggtgagcagtctgggcaacacagag
aaaggcaaaaagagtgtccaactatctctgaacccccaaaatgtcaacaaagtgctgagt
gcagaggccctgaaaccaggcatgctgctcacaggcactgtgtccagcctggaagaccat
ggctacctagtggacattggtgttggtggggccagagcttttctgccactacagaaagcc
caggagtatatcagacagaagaacaaaggtgctaaactgaaggtgggtcagtacttgaac
tgcttcattgaagaggtgaaaggcaacggaggagttgttagtctgtctattggtcattca
gaagtttctactgccattgctactgaggagcaacactggacccttaataacttgctacct
ggactggtggtcaaagcccaggtacagaaggtgaccccatttggccttcggttaaacttc
ctcacattcttcactggcctggttgattttatgcacctagagcccaagaaagctggaacg
tacttctcgaatcaagcagtaagggcctgtgtcctctgtgtccatcctcggaccagagct
gtgcggctgagcctgcgccccatcttcctgcagcctgggcgcccactcacccggctgtct
tgtcagcacctgggagctgtgttggatgatattcctgtccagggctttttcagcaaggct
ggggccactttcaggctgaaggatgggtctttggcctatgctcggctcagccatctctct
gattctaagaacaccttcaaacctgaggccttcaagccaggaaacactcacaagtgtaga
atcatcagctacagccaaatggatgaactggctttgctctctttgcggacgtctgttatt
gaagctccataccttggatatcatgacatcaaacctgggacattggtaaagggcacagtg
ctgaccataaagccatatgggatgttggtgaaggtgagtgagcaaatcaggggcctggta
cctcccatgcacctggctgacatcctgataaagaatccagagaagaagtaccacatcggg
gatgaagtcacatgccgggttttgctttgtgaccctgatgctaagaagctgatgatgacc
ctgaagaaaaccctggttgagtccaagctacctgccattacctgctatgctgacgctaag
cctggtctgcagacacatggcttcattctcagagccaaggacttcggctgcattgtgaaa
ttctacaatgatgtgcagggactggtacccaagcatgagctcagtgccgagtacgtccct
gaccctgagagggtcttttacactggccaggtggtgaaggttgcagtgctgaactgtgag
ccgtccaaagagaggatgctcttatccttcaagctgttgagcgatccaaacaaagagcat
gtggagcacagtaagaagaagagaaaatctgttaacgttgggcagttggtggatgtgaag
gttttagagaagaccaaagatgggctggaggtggctgtcctgccccacaacatccctgct
ttcctccccacgtctcacctgtcagaccacgtcgccaatggcccactgttgtatcactgg
ctccaggctggtgacacccttcacagagtcctgtgtctgagccagagtgagagacatgtt
ctcctttgcaggaaaccagctttggtctccacagtcgagggaggccaggatcccaagagc
ttctcagaaatccatcctggaatgctgctcatgggtttcgtgaagagcatcaaggactac
ggtgtgtttgtccagttcccctcaggtcttagcggcctggcccccaaagctatcatgagt
gacaaatttgtgacctccacaagtgaccactttgtcgaggggcagaccgtggttgcaaag
gtgaccaacgtggacgaggagaagcagcggatgctgctgtccctgcggctgtcggactgc
actctgggggacctggccaccaccagcctcctgctcctgaaccagtgcctggaggagcgg
cagggcgtgcgcagtctcatgagcaaccgagactctgtgttgatccagacgctggccgag
atgaccccaggaatgatccttgacctggaggtacaggaggtgttggaagatggctctgtg
gtgttcagtgagggcccagtgcctggcctggtcctgagagccagcaaatatcatcgagca
gggcaggaagtggaatctgggcagaaaaagaaggttgtgatcttaaacattgacatgttg
aagttggaagtacatgtttccctttgccacgatttagtgaatagaaaagctaaaaagctg
aagaaaggcagtgaacaccaggcgattgtgcagcacttggaggagtcctttgccgttgcc
tccttagtagagactggccacctggcagccttctccctgacctcgcatctcaatgacacc
ttccgctttgactcggagaagttgcaggtgggacagggtgtctccttaaccctcaagacc
acggaaccgggagtgactggtcttcttttggctgttgaggggccagctacaaagaggacc
atgagacagacccggaaggactctgagacagtcgacgaggatgacgaaggggactcggca
gtgattgtagggactgtaaggaagcacaccctctccattggggacatggtcacagggact
gtcaagtccattaagcccactcatgtggttgtgaccctggaaaacggcatcattggctgt
atccatgcctcccacattctagatgatgttccagtgggcacatctcctactgccaagctg
aaagttggaaagaaggtcactgcccgagtgattggcgggcgagacatgaagacattcaag
tttctcccaataagtcatcccagatttattcgaaccatcccggagctgagtgttcggcca
agtgagctggagaaggatggccacactgctctcaacactcactcagtcagccctttggag
aagattaaacagtaccaggctggtcagaccgtgacttgcttcttgaagaagtacaatgtg
attaagaaatggcttgaggtggagattgctccagacgtccggggaagaattcccatgttg
ctcatttctcttagctttaaggtcctgaaacatccagataagaagttccagattggccag
gccctgaaggccactgtggttggcccagattcctccaaggccttcttgtgtctctcactc
ataggtcctcacaagcttgaaaaaggggaggtggccatgggccgagtggtgaaggtgact
cccaaaaagggtctgactgtctccttccccttcgggagggttggaagagtcagcgtgttt
cacttgagtgactcctactcagaggcgcccctggaagccttcaccccccagaagattgtc
aggtgttatgtcctgtccactgaaggtgatgtattgactttgtcgctgcgatcatccagg
acaaacccagagacgaaaagcaaagtaccagatccggagattaattccactcaggacatt
cgggaagggcagctcctgaggggctacgtgaagtccgcgcagccgcacggcgtgttcttg
ggccttggcccctcagttgtgggattggcccagtacccacatgtttctcagaacagcccg
tccgagaaagccctttatgacagatacctccctgaagggaagctgctcacagccaaggtc
ctaagtgtgaaccaccagaagaacctggtagagctgtcgttcctccccagtgacaccggg
aagccagacgtgtttcctacccccctaggactgccagttctaaataaaggggagaggcaa
atagaggcagaggagagacaccacgtagaagaagagaaagagaaggagaagaaccagaaa
aggaaagagaagaggaaacagaagggacaggaggaggcgcagctgcctggcaaagagaag
aaagagccccagaaaccacaagcagagaagcagggcaagcggccgcacctggagtctgca
cgtgagcaggaaagggcaaacaagaagcagaagaaagctgccccggccgaggaggatgac
agtggcgttgaagtgtattatcgggaaggagaagaggagattgaagagacgggtgcgctg
cccaaggaaaggcagaccaggccagcagatgtgccccgactgcagctgtcttctggtttc
gtttgggacgtgggactagaatctctgaccccagccttgccacctcgaggagagagctca
gacagcgaggaggatgacaagccacagcaagccacgcagaagaagaaaagcaagaaggaa
agggagttggagaagcagaaggcagagaaagagctgtcccgcattgaggaggcactgatg
gatcctgggcgacagccagagtcagcagatgattttgaccggcttgtgctgagctccccc
aacagctccatcctgtggctgcagtacatggccttccacctgcaggccacggagatcgag
aaggcccgggctgtggccgagagggctctcaagaccatctccttcagagaggagcaggag
aagctgaacgtgtgggtggcgctgctgaaccttgagaacatgtacggctctcaggagtca
ctgaccaaggtctttgagcgggccgtgcaatacaatgagcctctcaaggtctttctccaa
ctggctgacatctacaccaagtcagagaagttccaggaagctggtgaactctacaaccgg
atgctgaagcgtttccggcaggagaaagctgtttgggtcaagtatggagcctttcttttg
cggaggggccaggctggggccagtcaccgtgcaatgcagcgagccctcgagtgcctgcct
aaaaaagagcacgtggatgtgctctccaagtttgcccagcttgagttccagctgggggat
gcagagcgagccaaggccattttcgagaacacactgagcacctacccaaagcgcacagat
gtctggtcagtctacatcgacatgaccatcaagcacggcagccagaaggaagtccgggac
atcttcgagcgggtcattcacctgagtctggcccccaagcgaatgaaattcttcttcaag
cgctacctggactatgagaagcaacatggcactgagaaggatgtgcaggcagtgaaggcg
aaggccctggagtatgtagaggcgaagagctccgtgttggaggactag
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integrated database retrieval system
