Miniopterus natalensis (Natal long-fingered bat): 107544294
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Entry
107544294 CDS
T05883
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mna03037
]
107544294 (CCDC88A)
Cilium and associated proteins [BR:
mna03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107544294 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
107544294
NCBI-ProteinID:
XP_016077614
LinkDB
All DBs
Position
Unknown
AA seq
1874 aa
AA seq
DB search
MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTSLDEYVALVDGVFLNQVMLQINPKLE
SQRVNKKVNNDASLRIHNLSILVRQIKCYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MTQEEIEPLLKNMALHLKRLIDERDEHSETIVELSEERDGLHFLPHGSSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS
DARSARMYRDELDALREKAIRVDKLESEVTRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVSELTSSRLLKLEMENQSLTKTVEELR
STMDSAEGNTSKILKIEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
SKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKFKKRLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM
AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQ
QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETCQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKALFKEIGIYKESCTRLKELEKENKELVKRATID
IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESK
LESTLKKSLEIKEEKIATLEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSP
PSASGEDSKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNSNLQ
AQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENE
SVVKEREDLKSLYDSLIKDHEKLELLHERQASEYECLIAKHGTLKSAHKNLEAEHKDLED
RYNQLLKQKGQLEDLEKTLKVEQEKMLLENKNHETIAAEYKKLCGENDRLNHTYNQLLKE
TEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYEPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSGEGFLQLPHQDSQ
DSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMV
LAGGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSTGFRSKQLVNNKDA
TSFEDISPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEIKAGAVNIQSRPQ
SHSSGEFSLLHDHEAWSSSGSSPVQYLKRQTRSSPVLQHKMPETLESRAHHKIKTGSPGS
EVVTLQQFLEESNKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKSKPVSCGLARSVSGK
TPGDFYDRRTTKPEQFVRPGPRKTEDTYFISSPGKPTPGTQGKIKLVKESSLSRQSKDSN
PYATLPRASSVISTAEGTTRRTSIHDFLTKDSRLPVSVDSSPATADSNITAASNMDKVQE
SRNSKSRSREQQSS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaatttttactccccttctggagcagttcatgaccagccctttggtcact
tgggttaaaacgtttggacctctggctgcaggaaatgggaccagcctggatgaatatgtg
gctttggtggatggggtattcttgaaccaggtcatgctccaaattaatcctaaattggag
agtcaaagagtaaataaaaaagtcaacaacgatgcctcacttagaattcataatctgtcc
attttggtgagacaaataaaatgctattatcaggagactttgcagcaattgatcatgatg
tcattgccaaatgtcttaatcattggcaaaaaccccttctctgaacaaggcacagaagaa
gttaaaaagttgcttttacttttactgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaattcaaggtttagattttgatacaaaagcagcagttgccgcacatatt
caagaggtaacccataatcaggaaaatgtgttcgatttgcaatggatggaagtgactgat
atgactcaggaggaaatagaaccactcttgaaaaatatggcattgcatctaaaaagactt
atagatgagagagatgaacattcagagactatcgtagaactttctgaagaacgggatggt
cttcattttctaccccatggctcttcgtctgcacagtcaccctgtggttctccaggcatg
aagcggacagaaagtcgacaacatctgtcagtggaactggcagatgctaaggccaagatc
agaaggcttaggcaggaattggaggaaaagactgaacagttgctggactgtaaacaagaa
cttgagcaaatggaaatagaactaaaaaggctgcagcaagagaacatgaatttgctttcg
gatgctcgttctgcaagaatgtaccgagatgaattagatgcacttcgagagaaggcaatc
agagttgataagcttgaaagtgaagtcaccaggtataaagagaggctacatgatattgaa
ttttataaagcaagagttgaggaattaaaagaagacaatcaagttttattagaaacaaaa
accatgttggaagaccaattagaaggaactcgagctcgttctgataaattacatgaatta
gaaaaagagaatttacaactgaaggctaaactgcatgatatggaaatggaacgtgatatg
gatagaaaaaagattgaagaattaatggaagaaaatatgactttggaaatggcacagaaa
caaagtatggatgaatcattacaccttggctgggagttggaacaaatatccagaactagt
gaactttccgaagcaccacagaaatctttgggccatgaggtgagtgagttgacatcaagt
aggttactgaagttggagatggaaaaccagagtttgacaaaaactgtagaagagcttcgg
agtactatggattctgcagaaggtaacacctccaaaatcctgaaaattgaaaaagaaaat
caaagactaagtaaaaaggttgaaattcttgaaaatgagattgttcaagaaaagcaaagt
cttcaaaattgtcagaatttaagcaaggatctaatgaaggagaaggctcagcttgaaaaa
acaattgaaacacttcgagaaaattcagagagacagattaaaatattggaacaggaaaat
gaacatctgaatcaaactgtgtcttccttaaggcagcgctcccagataagtgctgaagca
agggtgaaagacattgaaaaggaaaataaaattctccatgaatctatcaaagaaacaagt
agcaagctaagcaagattgaatttgaaaaaagacaaattagaaaagaattggaacattat
aaagaaaaaggagaacgagcagaagaacttgaaaacgagttgcatcatctcgaaaaggaa
aatgaattgttacagaaaaagataaccaatttaaaaattacttgtgaaaaaattgaggcc
ttagaacaagaaaattcagagctagaaagagaaaataggaaatttaaaaaaagattagat
agctttaaaaaccttacttttcagttagaatccctagagaaagagaattcccaacttgat
gaggaaaacttagaactgcgaaggaacgtggaatctttgaagtgtgcaagcatgaaaatg
gctcagctacaactggaaaataaagaactggaaagtgaaaaagagcagcttaagaagggc
ttagagcttatgaaagcatctttcaagaaaacagaacgcttagaagttagctaccagggc
ttagatacagaaaaccaaaggctgcagaaggctctggagaacagcaataaaaaaattcag
cagttagagagcgaactacaagacttggaaatggaaaatcagacattgcagaaaaaccta
gaagagttaaaaatatctagcaaaagactagaacagctagaaaaagaaaataaatcactg
gagcaggagacttgtcaactggaaaaggataagaagcaactggagaaggaaaataagaga
ctccgacagcaagcggaaattaaagataccacgctagaggaaaataatgtgaaaattgga
aatctggagaaagaaaacaaagctctcttcaaagagattggtatttataaagaatcttgc
actcgtctgaaagaattagagaaggaaaataaggagcttgtaaaaagagcaactattgat
ataaaaactttggttacattacgggaggatttggtgagtgaaaaattgaaaactcaacaa
atgaataatgatcttgaaaaattaacccatgagcttgagaagatagggttgaataaagag
cgactcttacatgatgagcaaagtactgatgacagtaggtacaaacttttggaatcaaaa
ttagaatccactctaaagaagtcccttgaaataaaagaggaaaaaattgctactttagaa
gctcgattagaggaatccacaaattataaccagcaattgcgccaagaacttaaaacagtg
aaaaagaattatgaagcccttaaacagagacaagatgaggaaaggatggtacagagccct
ccttcagcttctggtgaagatagcaaatgggagcgagaaagtcaagaaacaaccagagag
cttctgaaagttaaagacagattaattgaagtagaaagaaataatgctacactgcaagca
gagaagcaagcgctgaaaacgcaactgaagcaacttgagacacagaacagtaatttgcag
gctcagattcttgcacttcagaggcagacagtgtcattacaagagcagaatactaccctt
caaacacagaatgccaagcttcaggttgaaaattccacacttaattcccaaagtacttct
cttatgaaccagaatgcacaactcctaatccagcagtcttccttagaaaatgaaaatgaa
tctgtagtcaaagaacgagaagacctcaaatctctctatgattctctgatcaaagatcat
gagaaactggaacttcttcatgaacggcaggcttcagagtatgaatgtctcattgctaaa
catggaactctcaagtctgcccacaaaaatcttgaggcggaacataaagatcttgaagat
cgttataatcagttactaaaacagaaaggacaattggaagatttggaaaaaacactgaaa
gtagaacaggaaaaaatgctacttgaaaacaaaaaccatgagactatagctgcagaatac
aagaaactttgtggtgaaaatgataggttgaatcatacatataatcagcttttaaaagag
actgaagttttacaaactgaccataaaaacttgaaaagtcttctaaataattccaaactg
gaacaaacaagattagaagctgaattttcaaagctaaaggaacaataccagcagttggac
attacatctaccaagctaaataaccagtgtgagttgctaagtcaacttaaaggaaattta
gaagaagaaaatcgacatctactagatcaaattcagacattaatgctgcagaacagaaca
ctgttggagcagaatatggaaagcaaggatctttttcatgttgagcaaagacagtacatt
gataagttaaatgaattaagacgacaaaaggagaaattagaagagaaaattatggatcag
tacaaattttatgagccatctcctccaagaaggagaggcaactggattactttaaaaatg
agaaaattgataaagtctaagaaggatattaatcgggagcgtcagaaatctctaacatta
acacctacccgctcagactccggtgaaggatttcttcaactcccgcatcaagatagtcaa
gatagttcttcagtaggttcaaactctttagaagatggccaaactttggggaccaagaag
agcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagac
aaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtc
ctagcaggaggacagtggacaggtagtactgagaatttggaggttcctgatgatatttca
acgggtaaaaggaggaaagaattgggagctatggccttctctactacagctatcaacttt
tcaactgtcaactcttctacaggcttcagatccaagcagttggttaataataaagatgct
acatcctttgaagatataagtccacaaggtattagtgatgattctagtacgggatcaaga
gttcatgcttcgagaccagccagccttgatagtggcaggacatccactagcaatagcaat
aacaatgcttcactccatgaaatcaaagcaggtgcggttaatatccaaagcaggccacaa
agccatagcagtggagaatttagcctgcttcatgatcatgaggcttggtccagcagtggt
agcagtccagtccagtacttgaaaagacagaccagatcaagtccagtgctccagcacaaa
atgcctgaaacattagagagtcgagcacatcacaagatcaaaactggttcccctggaagt
gaagttgttactctacaacagtttttggaagaaagcaacaagcttacctcaatacagata
aagtcctcaagtcaagaaaatctgttagatgaagtaatgaaaagtttgtctgtctcttct
gactttttgggaaaaagcaaaccagttagctgtggtctggccaggtcagtaagtggaaaa
actccaggagacttctatgatagacggacaactaagcctgaacaatttgtgagacctggt
cctcgaaagactgaagatacctactttattagttctccaggaaaacctactccaggcact
caaggaaagataaaattagtaaaagaatcttctttgtcacgacaatcaaaagatagtaat
ccttatgccactttacctcgtgcaagcagtgtgatctctactgccgaaggaactactcga
aggacaagcatccatgattttttgaccaaggacagtagactacctgtttcagttgattca
tcaccagctactgctgatagcaacatcactgcagcatctaatatggacaaagtacaagaa
agcagaaattcaaaaagcaggtctagggagcaacaaagctcctaa
DBGET
integrated database retrieval system
