Miniopterus natalensis (Natal long-fingered bat): 107546104
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Entry
107546104 CDS
T05883
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107546104 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mna03032
]
107546104 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
mna03400
]
107546104 (TOPBP1)
DNA replication proteins [BR:
mna03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
107546104 (TOPBP1)
DNA repair and recombination proteins [BR:
mna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107546104 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
107546104
NCBI-ProteinID:
XP_016079853
LinkDB
All DBs
Position
Unknown
AA seq
1516 aa
AA seq
DB search
MSNNDKEPFFVKFLKSPDNSECFLKALESMKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGGVFDHLKKLGCRIVGPQVVLFCMHHQQCVPRAEHPVYNMVMSDVTVSCTSLEKDK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWVKTLWEKSQ
ENTITRYTDINMEDFKCPIFLGCIICVTGLCGLERKSVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVEKGFCQDESIYKTEPRPGTNTVPDTSTPA
GQINTVNSRTLSDVSHISNISASCVNESIYNSILHSKVEPALENLENLDVSAFQVPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAHRP
HVVGAKWLLECFSKSYMLPEEPYIHANYKPVEIPVSDQPESKTALLKKNSFSKKDFASAE
NHEQADEDLLSQYVNNNPIVVEAAKSEVGAFNDTTYIEPFNDSTHISLQEENQTSVSHCP
PDASTITEEGLFSQKSFLVLGFSDENESNIATAIRENAGKVISLQSRIVADYAVVPLLGS
EIEATVGEVVTNTWLVTCIDCQTLIDPKSSPLFKPIPVMAGMTPLEDCVISFSQCVGAEK
DSLTFLAKFLGASVQEFFVRKSNAKKGMFASTHLVLKEPSGSKYEASKKWNLPAVTIAWL
LETARTGKRANESHFLIENSTKEEQSLETEITNGVNLNSNALEHPATCLETHRKTAVTPL
DMNRFQSKAFRAVISQHTRQASVPPAAQPLQKEPSLDLDTPSKFLSKDKLFKPSFDVKDA
LAALETPGGPTQKNRKLSTPLSEVIVRNLKLALANSSRDAVALSASPQLKGAQSEKEEAP
KPLHKVVVYVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRQNDTNREYKSVK
ERGIHIVSEHWLLECAQEYKHLPESLYPHTYNPKRSLDISAVQDDRFGPSRLLPADGTQE
EPEPLPVEENDIDMTAINKEVTTSNGNGRNDSKGALTQTLEMRENFQKQLQEIMSATSIV
KPQGQRTSLSRSGCNSASSTPDSTRSARCGRSRVLEALRQSRQTVPDINTEPSQNEQIIW
DDPTAREERARLASNLQWPSCPTQYSEPQVDIKTLEDSPFQEPLHDLKTAEEALCDPGNI
CVTEAPKHPTSEELETKDSHLIPTPQAPSIAFPLANPPVAPHPREKIITIEETRENLKKQ
YTFQLSSLNPQERIDYCHLIEKLGGLVIEKQSFDPNCTHIVVGHPLRNEKYLASVAAGKW
VLHRSYLEACRSAGRFMAEEDYEWGSSFILDALPGITVQQRRLALAAMRWRKKIQQSQQS
GIMEGAFSGWKVILHVADQSREAGFRRLLQSGGAKVLPGHSVPLFKEATHLFSDCNKLKP
DDSGINIAEAAAQNVYCLKTEYIADYLTQETPPQVENYCLPEAVPFLQNNKEPGPGLSQK
RKAPAEKNNTKRPRVH
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaatgacaaagaaccgttttttgtgaagtttttaaagtctccagacaattcc
gaatgctttcttaaagctcttgagtcaatgaaagagttccagtcagaagaatatcttcag
attattacagaagaagaggccttgaaaataaaggagaatgatagatcactttatatctgt
gaccctttcagtggtggtgtctttgatcacctcaaaaagcttggctgcagaattgttggt
cctcaagtagtcctattttgtatgcaccaccagcaatgcgtcccaagagctgaacatcca
gtttataatatggttatgagtgatgtaactgtatcttgtacaagcctggaaaaagacaaa
agggaagaagttcataaatatgtacaaatgatgggtggacgcgtatacagagaccttaat
gtatcagtaactcaccttattgccggagaagttggtagcaaaaaatatttagttgctgca
aatctaaagaaaccaattttgcttccttcttgggtaaaaacactgtgggagaagtcacaa
gagaatacaataactagatatactgatataaacatggaagacttcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttgtgtggcttagagaggaagtcagttcagcag
ctcacagttaagcatggaggtcaatatatgggacaattgaaaatgaatgaatgtacacac
ctcatcgtgcaagaaccaaaaggtcaaaaatatgaatgtgccaagcgatggaatgtacac
tgtgtgaccacgcagtggttttttgacagtgttgagaaaggtttttgtcaggatgaatcc
atatacaagacagagcctagaccaggaacaaacactgtgcctgatacttcaactcctgct
ggccagatcaacacagttaatagtcgtactctttcagatgtcagtcatatttccaacatc
agtgcaagttgcgtaaatgaatcgatatataattccattcttcatagcaaagtggagcct
gcgcttgaaaatctagaaaatctggatgtcagtgcatttcaagtacctgaagatttatta
gatggttgccggatatatctttgcggttttagtggcagaaaactagataaactgaggcgg
cttattaacagtggaggtggagttcgatttaaccagctcaatgaggatgtaactcatgtt
attgtgggagactatgatgatgaattgaagcagttttgggataaatcagcccacaggcct
catgtggtgggagcaaaatggttgctagagtgttttagtaaaagttatatgcttcctgaa
gagccatatatccatgctaattacaaaccagtggaaattccagtttcagatcaacctgaa
agtaaaacagcccttttaaaaaagaacagtttctccaagaaagactttgcttctgctgaa
aatcatgagcaagctgatgaagatctactctctcaatatgtaaataataacccaatagta
gttgaagctgcaaagtctgaagttggggcctttaatgacactacttatatagagcccttt
aatgattctactcatatttctctgcaagaagaaaatcaaacttctgtcagtcattgcccc
cctgatgcttctacaattactgaagaaggtttatttagccaaaagagtttccttgttttg
ggttttagtgatgaaaacgaatctaacattgcaactgccataagagaaaatgctggaaaa
gtcatatcccttcagagcagaattgttgctgattatgctgtggttcctctgctggggtct
gaaatagaagcaactgtgggagaagttgttacaaatacctggctggtaacttgtatagac
tgtcagactttaattgatccaaagtcaagtcctctcttcaagccaatcccagtaatggca
ggaatgactcctttagaggattgtgttatttcattcagccagtgtgtgggagcagaaaaa
gattcattgacattcttagcaaagttccttggagcaagcgttcaagaattctttgttcgc
aaatccaatgcaaagaaaggcatgtttgctagtacacatcttgtattgaaagaaccaagt
ggttctaaatatgaagcttccaagaagtggaatttgccggcagttactatagcttggctg
ttggagactgctagaacgggaaaaagagcaaatgaaagccattttctgattgaaaattca
accaaagaagagcaaagtttagaaactgaaataacaaatggagtgaatctaaattcaaat
gctctggagcatcctgccacatgcctggaaactcacagaaaaacagccgttaccccttta
gatatgaaccgctttcagagtaaagctttccgtgctgtgatctcacagcacaccaggcag
gcttcggtccccccagcagcacagccactccagaaggagccctccctagacctggataca
ccatcaaaatttctgtccaaggacaaactcttcaagccttcctttgatgtaaaggatgca
ctggcagccttagaaactccaggaggtcctacccaaaagaacaggaaactgagtacaccg
ctctcagaagtcattgtcagaaacttgaaacttgctttggcaaatagctcgagagatgct
gtcgctctttctgccagccctcaactgaagggtgctcaatcagagaaggaagaagctcca
aagccacttcacaaggtagtggtttatgttagtaaaaaactcagtaagaagcagagtgaa
ctaaatgggattgcggcctctctaggagcagattacaggtggagttttgatgaaacagtg
actcatttcatctatcaaggccgacagaatgacactaaccgagagtataaatctgtaaaa
gaaagaggaatacatattgtttcagagcactggcttttagaatgcgcccaggagtataaa
caccttcctgaatctctgtatccacatacttataaccccaaaaggagcttggatatcagt
gcagtgcaagatgacagattcggtcctagtcgactgctccctgctgacgggacacaggag
gagccagagcctttgcctgtagaagaaaatgatatagatatgaccgccattaataaagag
gtaacaacatcaaatggaaatggaaggaatgactctaaaggagctctaacacagaccttg
gagatgagagagaatttccaaaagcaactgcaggagataatgtctgcaacgtccatagtg
aaaccccaagggcagaggacctccctttcaagaagtggttgtaacagtgcttcttcaacc
cctgacagcactcgctctgcccgctgtggacgaagcagagtcctggaggccctaaggcag
tctcgtcaaacagtacctgatatcaacacggagccctctcagaatgaacagatcatttgg
gatgaccctacagccagagaggagagggcaagacttgccagcaatttgcagtggcctagt
tgtcccacacaatactctgaacctcaggtcgacattaaaacattggaggattctcctttt
caggagcctttacatgatttaaaaactgctgaagaggctctctgtgatcctggaaacata
tgtgtgactgaagctccaaaacacccgacctctgaagaactggaaacaaaagacagccac
ctgatcccgacacctcaagcccccagtattgcctttcccctggccaacccacctgtggct
ccacaccctagagaaaagattataacaatagaggagactcgtgaaaacttaaaaaaacag
tacacatttcagctgtcatctctgaatcctcaagaacgtattgattattgtcacctgatt
gaaaaactaggtggactagtaatagagaagcagtcctttgatcccaactgcacccacatt
gttgtggggcatccacttcgaaatgagaagtatttagcctcagtggcagctgggaagtgg
gtgcttcatcgctcctaccttgaagcatgcaggagtgctgggcgcttcatggcggaagaa
gactacgaatggggaagtagtttcatacttgatgctttgcctggaatcactgtacagcag
cgaagactagcacttgcagcgatgagatggaggaaaaagatccagcagagtcaacaatcg
ggcattatggagggggcatttagtgggtggaaagttattttacatgttgctgatcagtcc
cgagaagcaggattcaggcgtctgcttcagtccggaggagcaaaggtgctacctggtcat
tctgtgcctttatttaaagaagctacacatctcttttctgactgtaataaactgaaacca
gatgactcaggaattaatatagcagaagctgctgcccagaatgtgtactgcttgaaaaca
gaatacattgcggattatcttacacaggaaacccctcctcaagtagaaaattactgtcta
ccagaagctgttccgtttcttcagaataataaagaaccagggcctggattatcacagaag
agaaaagctcctgcagagaaaaataataccaaacggcccagagtacactaa
DBGET
integrated database retrieval system
