Miniopterus natalensis (Natal long-fingered bat): 107546192
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Entry
107546192 CDS
T05883
Symbol
PAN2
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107546192 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mna03019
]
107546192 (PAN2)
Enzymes [BR:
mna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
107546192 (PAN2)
Messenger RNA biogenesis [BR:
mna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107546192 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
107546192 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_like
Motif
Other DBs
NCBI-GeneID:
107546192
NCBI-ProteinID:
XP_016079986
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPTLERYSSFQVNGSDDIR
QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDESEDMHSLLLTDSSTLLVGGLQNHILE
IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKISLRDLRTFKVEHEFDAFSGSLS
DFDVHGNLLATCGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP
RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPIGREE
EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEASGKGNLARLIQRWNRFILTQLHQDMQELEVPQAYRGAGNSSFCSSGDSVIGQLFSCE
MENCSLCRCGSETVRASSTLLFTLSYPEGSNSDKTGKNCDFAQVLKRSICLEQNTQAWCD
NCEKYQPTIQTRNIRHLPDILVINCEVNSLKEADFWRMQAEVAFKMAIKKHSGEISKNKE
FALADWKELGSPEGMLMCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQQPGYP
PSQWGPARAEEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYL
FNDFLIEPIDKHEAVQFDMNWKVPAILYYTKRNLNSKYNLNIKNPIEASVLMAEASLARK
QRKTHTTFIPLMLNEMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITC
VRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFL
IDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGE
THDSIEDARTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKN
AAVFPSVLAL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgagggtctggacccaggactggcagagtatgccccagccatgcattctgcc
ctggaccctgtcctggatgcccacctgaacccaagtctgctacagaatgtggagctggac
ccggagggagtggccttggaggctcttcccgtccaggagtcagtgcacataatggaaggt
gtctactctgaattacacagtgtggtggctgaagtgggtgtacctgtctccgtctcccac
tttgacttgcacgaggagatgctgtgggtgggaagccacgggggtcatgccacttcattt
tttggcccaactttggagcgctactcatcctttcaggtcaatggcagtgatgacattcgg
cagatccagagcctggagaatggtatcctttttctcaccaagaacaacctcaagtatatg
gcccgtggaggcctcattatatttgattatctgctggatgagagtgaggatatgcacagt
ctcctgctcactgacagcagcacgctgcttgttggtggactgcagaaccacatattggag
attgaccttaacactgtccaggagactcagaagtatgcagtcgagacacctggagtcacc
atcatgagacagacaaaccgcttcttcttctgtggccacacatctggcaagatttccctg
cgagaccttcgtacttttaaggtggaacatgagttcgatgctttctcagggagtctgtca
gattttgacgtgcatggcaacctgctcgccacttgtggcttctccagccgcctcaccggc
ctcgcctgtgaccgtttcctaaaggtgtatgatctgcgcatgatgcgtgccatcacacca
cttcaagtacatgtggatcctgccttcttgcgcttcatccctacgtatacttctcggctt
gctatcatctcccagtcggggcagtgccagttttgtgaacccacaggcctggccaaccca
gcagacatctttcacgtgaatcctgtggggcctctgctgatgacctttgatgtgtcagcc
agcaagcaggccctggcctttggagattctgagggctgtgtacacctctggactgattcc
cctgagccttccttcaatccctactcccgggagaccgagtttgctttgccctgtcttgtg
gactcactgcctcctctggactggagccaggacttgctgcctctttccctcatccctgtc
ccactcactacagacacgcttctctctgattggcctgctgccaactctgccccggctccc
aggcgagcaccccctgtggatgcagagattctgcgcaccatgaagaaggtgggcttcatt
ggctatgcaccaaacccccgcactaggctgcgtaatcagattccttaccgactcaaggag
tcagacagtgaatttgacagcttcagccaggtcactgagtcaccaatagggcgggaagag
gagccacatctccacatggtctctaagaaataccgcaaggtaaccatcaaatactccaag
ctagggctggaagactttgacttcaaacactacaataagactctgtttgctggattggag
ccccacatccccaatgcttactgtaactgcatgatccaggtgctctatttcctggagcct
gttcgctgcctaatccagaaccacctttgtcagaaggagttctgcctggcatgtgagctg
ggcttcctcttccacatgttggacctctcccgcggtgacccttgtcagggcagtaatttt
cttcgggcattccgcaccattcctgaggcctcagcccttggtctgatcctggctgactca
gatgaggcttcaggcaagggcaatctggccaggctcatccagaggtggaatcgtttcatt
cttactcagctgcatcaggatatgcaggagctggaagtaccccaggcttatcgaggtgct
ggaaacagcagcttttgctcatcgggggactctgtcattgggcagctgttcagctgtgag
atggagaactgcagcctctgccgctgtggcagtgagactgtgcgagcctcatctaccctg
ctcttcacgctctcctaccctgagggtagcaacagtgataaaaccgggaagaactgtgac
tttgctcaggtgttaaagcgaagcatctgcctggagcagaatacgcaggcctggtgtgac
aactgcgaaaagtaccagccaacgattcagacacgcaacatccgccatctgccagatatt
cttgtcatcaattgtgaagtgaacagcttaaaagaagctgatttctggagaatgcaggct
gaggttgccttcaagatggcaataaagaaacacagtggggaaatctccaagaacaaggag
tttgctttggctgattggaaggaactagggagtccagagggcatgctgatgtgtccttcc
attgaggagttgaagaatgtctggcttcctttttctattcgcatgaagatgaccaagaac
aaaggactggatgtttgcaattggactgatggagatgagatgcagcagcctgggtacccc
ccctcacagtggggcccagccagggcagaggaagaacatggtgtctatgtgtatgacctg
atggctactgtggtacacatcctggactcacgcacagggggcagcctggtggctcacatc
aaagttggagagacttaccaccaacgcaaagagggcgttacccaccagcagtggtatctc
ttcaatgactttcttattgaacctattgataagcatgaagctgtgcagtttgacatgaat
tggaaagtgcctgctatcctttattacaccaaaaggaatcttaattccaaatacaacctg
aacatcaagaaccctattgaagcaagtgtcctgatggctgaagcctcactagcacgaaag
cagcggaaaacacatactacctttattccactgatgctgaatgagatgccacaggttggg
gacctggtgggcctggatgccgagtttgtcacccttaatgaggaggaagcagaattgcgc
agtgatggcaccaagtctaccatcaaaccaagccagatgtcagtagctaggattacctgt
gttcggggccagggacccaatgagggtatccccttcattgatgactacatctctacccag
gagcaggtggtggattatttgactcaatactcagggataaagccaggagatctcgatgcc
aagatttcctctaagcacctcacaactctcaagtctacctacttaaaacttcgttttctc
atagacattggagtcaagtttgtgggtcatggtctgcagaaggacttccgggtcatcaac
ctcatggtgcccaaggaccaagtccttgacactgtctatctatttcacatgccccgaaaa
cgaatgatttccctgcgattccttgcttggtactttctggacctgaagattcaaggagag
acccatgatagtattgaggatgctcgcacagctcttcagctctaccgaaagtatctggag
ctaagcaaaaatggtactgagcctgagtcctttcacaaagtgctcaagggcctttacgag
aagggccgaaagatggactggaaggttcctgagcctgagggccagacaagtcccaagaat
gcagctgtttttccctcagtgctggcactctga
DBGET
integrated database retrieval system
