Merops nubicus (carmine bee-eater): 103768068
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Entry
103768068 CDS
T08417
Symbol
RBBP6
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
mnb
Merops nubicus (carmine bee-eater)
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnb04121
]
103768068 (RBBP6)
Enzymes [BR:
mnb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103768068 (RBBP6)
Ubiquitin system [BR:
mnb04121
]
Ubiquitin ligases (E3)
U-box type E3
103768068 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
DWNN
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
103768068
NCBI-ProteinID:
XP_008933446
LinkDB
All DBs
Position
Unknown
AA seq
1683 aa
AA seq
DB search
YTDDNALIPKNSSVIVRRIPIGGVKATSKTYVISRTEPVGGTSKAIDDSSASISLAQLTK
TANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPSGPPPPSYTCFRCGKPGHYIKNCPT
NGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKP
PFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESEEHTC
PTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQGQQQQQPPHPKPPPPPPPRMR
QTITRNLQPLLRPTISRQQDPLMIPLASLASRSAAALSSLGPGQAAGLPVNPSSVLVSDL
PPAVSLLRGEKPDGPFRDADTVLPPAALVTAAEFSKSSPLAISSLLEEKGYQVPVLRQPA
LPSLLGPQGQSIPTTGHPMRAGAIRSAGGRPGWELSNRGRLHSERSQRTQAPALPASSQV
FVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAPANMSSAW
VPAAVPAGHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKI
QKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPR
RGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTIPQGEGEREYF
NRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQPRPPVNR
ENFSPDRFGPPGTRRETSPYARGRREDYPGGQSHRNRNIAGNYPEKPSGRESHGIKDPTK
SKEKEVENPLGDGKGNKHKKHRKRRKGDENEAFPTAELLEGARKPREAVTTEDVKTDSLF
MLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKTDKTKRKAEAAAPPKKETVT
KSAKASQEKVDTDREKSPRAEPPAKKVKEELPKTDSVKTSSSQKDEKALGTPRKVHPKVT
KDHPETRPAKEEKAKKDHPKETKSEKPSNKEEKSKKPTEKSKPSDAKPEKRKRKADEKAD
KEHDTTSVKVSKPDAAESKTSPKGKAEPDGEKGERTPEKDKSAFNNPAKKIKLNRETGKK
IVSGENVPPGKEPAEKPEPSSSKVKQEKAKGKARRKVTAADGSSSTLVDYASTSSTGGSP
VRKTEDKPDTKRTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEEDVKTTQV
PTSIGKPASVIKNVSGKLPNPIKHSEKETEPLEKTQKTTKEVSYESSQHDAKSSKSSVSN
EKGKTKDRDHSLSDKDTSEKRKSSVQPEKDHSERAAEQGNGKNASQSSKDSRSSEKHDTG
RGSTAKDFTPNRDKKSDHDSSRDHSSSKRREEKSELARRKDSPSRTRDSAAVQKSKPREE
RAEAPKKGAGDAKRSSYSPPRERKQPDHKAAHDSKRTAEEHKPPEKNPGKEKEKHVPEVK
SNKEKEPTGNKPALKLDSPEVKNEKEKEKEKEKDKSVAKPKPPVSSSSRLSSDLTRETDE
AAFVPDYNESDSESNVSAKEEEAAGKAPKEPKEKAAEKAKEEPSQTRSHSSSASSGESQD
SKKKKKKKEKKKHKKHKKHKKHKKHMGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKS
VTT
NT seq
5054 nt
NT seq
+upstream
nt +downstream
nt
aatacacagacgataacgctctgattccgaagaactcctcggtgattgtgagacgaatcc
cgattggaggagttaaagccaccagcaaaacatacgttataagccgaactgagccagtgg
gtggaacatcaaaagcaattgatgactcttctgcatctatttctctggcccagcttacta
agactgccaatctggctgaagccaatgcttccgaagaagataaaattaaagctatgatga
cacagtctggccatgaatatgatccagtcaattacatgaagaaaccctcgggtccacctc
caccttcatatacttgttttcgctgtggaaaacctggccactatataaagaactgcccaa
caaatggggacaaaaatttcgagtctgttcccagaattaaaaagagcacaggaattccaa
ggagtttcatgatggaggtgaaagatcccaatacaaagggtgctatgctgacaaacactg
gaaaatacgcgatcccaacgatcgatgcggaagcttatgctatagggaagaaggagaagc
ctccctttttaccagaggaaccgtcctcatcttcagaagaagatgatcctattccagatg
agctgttgtgtctcatttgtaaagatataatgaccgatgcagttgttattccctgctgtg
gaaacagttactgtgatgaatgtattagaacagcattgctggaatctgaggaacatacct
gcccaacgtgtcatcagacagatgtctctccagatgctttaattgccaacaagttcctgc
gccaggctgtgaacaacttcaaaaatgaaactggctacacaaaaaggctccgtaagcagg
gtcagcagcagcaacaaccgccacacccaaaaccccccccaccgccaccaccccggatga
gacaaaccataacacgcaacctgcagccgctgctccggcccacgatctccaggcagcagg
accccctcatgatccctctggcttctctggcttctcgctcagctgctgctctgtcgtcgc
tgggccccggtcaggcagccgggctgccagtaaatccgtcctctgttcttgtctctgatc
tccctccagcagtgtcccttctccgtggtgaaaagccagatggaccttttcgtgatgctg
atactgttttacctcccgctgctttggtgactgccgctgaattttctaaatcttccccgc
tggcaatcagcagtttgttggaagagaagggctatcaggtccctgtgctgagacagccag
cattaccaagtcttctgggcccacaaggacaatcaatacccacaactggtcatccaatga
gagctggtgccattcgctcagcaggtggcagaccaggctgggaactttcaaatcgaggac
gcctgcacagtgaacgttcccaaaggactcaggccccagcactaccagcatcttcacaag
tctttgtgcctgtgcctccacctcccttgtaccctccaccaccccacgcacttcctcttc
cacccggggtaccaccaccacagtttcctcctcagtttccacctggtcagcctccatctg
ctgggtacactgtcccccctccaggatatcccccagctcctgcaaacatgtcatcagctt
gggtaccagcagcagtaccagcgggtcactcaaataccatcccaacgacacaagcacctc
ctctatctagggaggagttttacagagagcagcggagacttaaagaggaggaaaagaaaa
agtccaaacttgatgagtttacaaatgattttgctaaggaattgatggaatataaaaaga
ttcaaaaggagcgtaggcgttcgttttccaggtccaagtctccctatagtgcttcatctt
actccagaagttcctatacctactccaagtcacggtcgggctcctcccgctcgcgctcct
actcgcggtccttcagccggtcccactcccgctcctactcccggtcaccaccctaccccc
ggcggggcaaggggaagagccgcaactaccgctctcggtcacggtcacacggttaccacc
gctccaggtccaggtcacccccatacaggagataccactcacggtcaaggtcgccggtgt
ttagaggtcagtctcccactaaacggactatccctcaaggggaaggagaaagggaatatt
ttaacagatacagagaagttcccccatacgatatgaaagcttactatggcagatctgttg
actttagagatccgtttgaaaaggagagatacagagaatgggaaaggaattatagagagt
ggtacgaaaagttttacaagggctatgctgttggtgctcagcctcggcctccagtaaaca
gagagaacttttctccagataggtttggtccacctggaaccagacgagagacttcgccgt
atgctcggggacgtagggaggattatcctggtggacagagtcacagaaaccgtaatatag
ctggaaattaccctgaaaaaccttctggaagagagagccatggcatcaaagatcctacaa
aatcaaaagagaaggaggtggaaaatcccctgggagacggcaaaggaaataaacacaaaa
aacaccggaagagaaggaaaggggatgagaatgaggcgtttcccactgcagagttgttag
aaggtgcgagaaaaccaagagaggcagttacaacagaggacgttaaaacggactctctgt
tcatgctcccaagcagagatgatgccacccctgtgagagatgagcctatggaggcagatt
ctattgctttcaagccagtatctgaaaaggagaaaaaagagaaggataagccaaaagcaa
aaacggataagacgaagcggaaagcggaagcggctgctcctcccaagaaggagactgtga
ccaagtcagcgaaagcttcccaggagaaggtggacaccgaccgcgagaaatcccctcgag
cagagcctcctgccaaaaaagtgaaggaggagttgccaaagacagacagtgttaagacat
cttcctctcaaaaggatgagaaggctcttggcaccccgcggaaagttcacccaaaagtga
cgaaagatcacccagaaaccaggccagccaaggaggaaaaggcaaagaaagaccatccaa
aagaaaccaagtcagagaagccctccaacaaagaggagaagtcaaaaaaacctactgaaa
aaagcaaaccttctgatgcaaaacctgagaaaagaaaaaggaaagcagatgaaaaggctg
ataaagagcatgacaccacgtccgtcaaggtctctaaaccagacgctgctgaatcgaaaa
catcaccgaaggggaaggccgagcccgacggggagaaaggagagcggactccagagaagg
acaagtctgcctttaacaaccctgccaaaaagattaaacttaaccgagaaactggcaaaa
agattgtgagtggagaaaatgtgccacctgggaaagagcctgcggagaaaccggagccga
gcagcagcaaagttaaacaagaaaaagccaagggaaaagcgagaagaaaagtgacagcag
ctgatggatccagttccactctggtagattacgccagcaccagctccactggaggcagcc
ctgttagaaagactgaagataagccagacacaaaacgaactgtcattaagaccatggagg
agtacaataacgatataacagcccctgctgaagatgtcattatcatgatccaggtccctc
agtcaaagtgggacaaagatgactttgagtcggaagaggaagacgttaagactacgcagg
tgcccacaagcataggaaaacctgctagtgttataaagaatgtcagtggtaagctaccaa
accccataaaacacagcgaaaaagagacagagcccttggagaaaacacagaaaactacaa
aagaggtgagttacgaaagctcccagcatgatgcaaaaagttcaaaaagttctgtgtcga
atgaaaaaggaaaaaccaaagaccgggatcattctttgtcagacaaggacacttctgaga
agagaaagagcagtgttcagccagaaaaagaccactcggagcgtgcagctgaacaaggaa
acggaaaaaatgcttctcaatcttccaaagacagcagatcttcagagaagcatgacactg
gccgtggatcgacagcgaaagacttcactcctaacagagacaaaaaatccgaccacgaca
gcagcagagatcattctagttccaagcgtagggaggaaaagagtgagctagcaaggagaa
aagactccccctcccgaaccagagactcggcagcagtgcagaagagtaagcccagagagg
agcgggcagaggcgcccaaaaagggcgctggagatgccaaaaggagcagctacagtcccc
cgcgcgagcgcaagcagcccgaccacaaagctgcccacgactccaagcgcacggcggagg
agcacaaacctccagagaaaaatccaggaaaggagaaagagaaacacgtgccagaagtaa
agagcaataaagagaaagagcccactggtaataaaccggctttgaaactggactcgccgg
aggtgaaaaatgagaaagagaaggagaaggaaaaagagaaggataaaagcgtggccaagc
ccaagcctccggtgagcagctcctcacggctctcctccgacctcaccagggagactgacg
aggccgcgtttgtgccagactacaacgaaagcgacagcgagagcaacgtgtcggccaagg
aggaggaggcggcggggaaggcccccaaggagcccaaggagaaggctgcagagaaggcca
aggaggagccgagccagacccgcagccacagcagcagtgccagctcgggggagagtcagg
acagcaagaaaaagaaaaagaagaaggagaagaagaagcacaagaagcataagaaacaca
agaagcataagaaacacatgggaaacgaaacggaattggagaagagccaaaaacacaaac
acaagaagaaaaaatcgaagaagagcaaagataaagagaaagatgaccaaaaagtgaaat
ctgtcaccacatag
DBGET
integrated database retrieval system
